RNA–Protein interactions for RNA: ENST00000411525.1

LINC00539-201, long intergenic non-protein coding RNA 539, humanhuman

TSL 3

Gene LINC00539, Length 664 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-201ENST00000411525 PRSS22Q9GZN4 317 aa8.81□□□□□ -1
LINC00539-201ENST00000411525 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
LINC00539-201ENST00000411525 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
LINC00539-201ENST00000411525 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
LINC00539-201ENST00000411525 IGKV1OR2-108A0A075B7D4 117 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 OR2J3O76001 311 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 TSPAN15O95858 294 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 MBP02144 154 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 OR10J1P30954 320 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 NDUFA5Q16718 116 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 TMEM41BQ5BJD5 291 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 MIC13Q5XKP0 118 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 Q6ZRG5 221 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 CYP2G1PQ6ZSU1 146 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 OR4X1Q8NH49 305 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 CXorf58Q96LI9 332 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 NOL4LQ96MY1 436 aaPredicted RBP8.8□□□□□ -1
LINC00539-201ENST00000411525 ZNF702PQ9H963 129 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 FBXL7Q9UJT9 491 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
LINC00539-201ENST00000411525 IGKV1D-37A0A075B6S9 117 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 TRBV9A0A0B4J1U6 114 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 TCRBV4S1A1TA0A5B7 111 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 MFSD2BA6NFX1 497 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 ZFP92A6NM28 416 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 H3BUA1 57 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 NDUFB8O95169 186 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
LINC00539-201ENST00000411525 RPL29P47914 159 aaKnown RBP8.79□□□□□ -1
LINC00539-201ENST00000411525 FHITP49789 147 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 RAB2AP61019 212 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 B2MP61769 119 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 BLOC1S1P78537 153 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 RHOGP84095 191 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 DEFA5Q01523 94 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 CFHR3Q02985 330 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 ZNF616Q08AN1 781 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 ACOT6Q3I5F7 207 aaPredicted RBP8.79□□□□□ -1
LINC00539-201ENST00000411525 TMEM95Q3KNT9 176 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 STPG3Q8N7X2 389 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 NECAP1Q8NC96 275 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 OR4F5Q8NH21 305 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 VN1R17PQ8TDU5 208 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 TRGV9Q99603 122 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 VSIRQ9H7M9 311 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 RPRMQ9NS64 109 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
LINC00539-201ENST00000411525 LINC00862A6NCI5 91 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 FAM223BA6NKX1 122 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 CLN5O75503 358 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 BRI3O95415 125 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 IGLC1P0CG04 106 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 M6PRP20645 277 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 NPBWR1P48145 328 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 MFAP4P55083 255 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 RPL15P61313 204 aaKnown RBP8.78□□□□□ -1
LINC00539-201ENST00000411525 PRR20EP86478 221 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 PRR20CP86479 221 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 PRR20DP86480 221 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 PRR20BP86481 221 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 PRR20AP86496 221 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 C15orf32Q32M92 178 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 PXDC1Q5TGL8 231 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 Q8N2B8 174 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 SLC39A9Q9NUM3 307 aa8.78□□□□□ -1
LINC00539-201ENST00000411525 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 SCGB2A1O75556 95 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 YIF1AO95070 293 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 TRGV3P03979 118 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 LINC00869P0C866 280 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 FCGR2BP31994 310 aaPredicted RBP8.77□□□□□ -1.01
LINC00539-201ENST00000411525 SELENOTP62341 195 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 ZNF90Q03938 601 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 Q56UQ5 140 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 OR10G4Q8NGN3 311 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 OR10G9Q8NGN4 311 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 OR10G7Q8NGN6 311 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 RCC1LQ96I51 464 aaKnown RBP8.77□□□□□ -1.01
LINC00539-201ENST00000411525 MS4A10Q96PG2 267 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 SLC25A22Q9H936 323 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 MED9Q9NWA0 146 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 PFDN2Q9UHV9 154 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 S4R3C0 116 aa8.77□□□□□ -1.01
LINC00539-201ENST00000411525 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 CTXND1A0A1B0GTU2 59 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 CLPSL1A2RUU4 121 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
LINC00539-201ENST00000411525 M0QZ24 198 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 GNG7O60262 68 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 NDUFA7O95182 113 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 IGHV3-23P01764 117 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 FABP1P07148 127 aa8.76□□□□□ -1.01
LINC00539-201ENST00000411525 H2AFB1P0C5Y9 115 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms