RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TPSG1Q9NRR2 321 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
LIMS1-205ENST00000410093 IGKV1D-37A0A075B6S9 117 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 TEX22C9J3V5 150 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 TIMM23O14925 209 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 EBI3Q14213 229 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 MISP3Q96FF7 219 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 SCO2A0A1W2PP80 73 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 HELTA6NFD8 242 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 FOXH1O75593 365 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 CNIH1O95406 144 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 HOXA5P20719 270 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 LGALS4P56470 323 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 TAS2R60P59551 318 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 MMDQ15546 238 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 MLANAQ16655 118 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 UBTD1Q9HAC8 227 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
LIMS1-205ENST00000410093 TRAV30A0A087WSZ9 112 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 TRGC2P03986 189 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 OR10J4P0C629 311 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
LIMS1-205ENST00000410093 CDX1P47902 265 aaPredicted RBP10.83□□□□□ -0.68
LIMS1-205ENST00000410093 HCP5Q6MZN7 132 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 SMIM12Q96EX1 92 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF503Q96F45 646 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 PAXXQ9BUH6 204 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 OR51M1Q9H341 326 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 FBXL15Q9H469 300 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
LIMS1-205ENST00000410093 POLR3KQ9Y2Y1 108 aaPredicted RBP10.83□□□□□ -0.68
LIMS1-205ENST00000410093 ABCA4P78363 2273 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 IGHV2-70DA0A0C4DH43 119 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 OVOL3O00110 214 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 HYPMO75409 117 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 SCGB2A1O75556 95 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 LY6HO94772 140 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 CNTFRP26992 372 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 GNG4P50150 75 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 MEOX2P50222 304 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 UBE2L3P68036 154 aaKnown RBP10.82□□□□□ -0.68
LIMS1-205ENST00000410093 TIGITQ495A1 244 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 VMO1Q7Z5L0 202 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 OR5AU1Q8NGC0 362 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF48Q96MX3 618 aaPredicted RBP10.82□□□□□ -0.68
LIMS1-205ENST00000410093 LPAR2Q9HBW0 351 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF355PQ9NSJ1 428 aa10.82□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF98A6NK75 572 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 NPIPB5A8MRT5 1133 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 GATA2P23769 480 aaPredicted RBP10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 UBE2E1P51965 193 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 COX19Q49B96 90 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
LIMS1-205ENST00000410093 TEX38Q6PEX7 206 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF562Q6V9R5 426 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 OCC1Q8TAD7 63 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 SIRPDQ9H106 197 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 PITPNC1Q9UKF7 332 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 ABCA12Q86UK0 2595 aa10.81□□□□□ -0.68
LIMS1-205ENST00000410093 I3L2K1 104 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 REG1AP05451 166 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 S100A7P31151 101 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 BRS3P32247 399 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 PDLIM4P50479 330 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 MFAP2P55001 183 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 KRTAP10-9P60411 292 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 S100A12P80511 92 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 LINC00305Q7Z4B0 112 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 THYN1Q9P016 225 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 CDC42EP3Q9UKI2 254 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 APCP25054 2843 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
LIMS1-205ENST00000410093 TRBV20OR9-2A0A075B6H5 130 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 NDUFS8O00217 210 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 PHOX2AO14813 284 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 FAM106CPP0CH98 169 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 HOXB4P17483 251 aaPredicted RBP10.79□□□□□ -0.68
LIMS1-205ENST00000410093 CDKN1AP38936 164 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 SUMO1P63165 101 aaKnown RBP10.79□□□□□ -0.68
LIMS1-205ENST00000410093 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
LIMS1-205ENST00000410093 ZNF90Q03938 601 aa10.79□□□□□ -0.68
LIMS1-205ENST00000410093 FXYD3Q14802 87 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms