RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ACOT6Q3I5F7 207 aaPredicted RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 HIST2H3PS2Q5TEC6 136 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 LPCAT3Q6P1A2 487 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 C20orf196Q8IYI0 205 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 HIST3H2BBQ8N257 126 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 C3orf56Q8N813 242 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 OR13D1Q8NGV5 346 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 ADAT3Q96EY9 351 aaPredicted RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 KRTAP2-4Q9BYR9 128 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 KRTAP2-1Q9BYU5 128 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 PRTFDC1Q9NRG1 225 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 SLC39A9Q9NUM3 307 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 NKIRAS1Q9NYS0 192 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 UBAP1Q9NZ09 502 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 LSM5Q9Y4Y9 91 aaKnown RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 TMEM56-RWDD3S4R434 201 aa0.09□□□□□ -2.39
PMS1-203ENST00000409593 SYNE1Q8NF91 8797 aaKnown RBP0.09□□□□□ -2.39
PMS1-203ENST00000409593 PEAK1Q9H792 1746 aa0.09□□□□□ -2.4
PMS1-203ENST00000409593 ZNF106Q9H2Y7 1883 aaKnown RBP0.09□□□□□ -2.4
PMS1-203ENST00000409593 DOCK5Q9H7D0 1870 aa0.09□□□□□ -2.4
PMS1-203ENST00000409593 TRAV26-2A0A0B4J265 109 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR4C46A6NHA9 309 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR2B3O76000 313 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 TPM3P06753 285 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 SMIM10L2AP0DMW4 78 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 SMIM10L2BP0DMW5 78 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 PSG9Q00887 426 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 CLECL1Q8IZS7 167 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 ANKRD29Q8N6D5 301 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 WFDC5Q8TCV5 224 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 GPR146Q96CH1 333 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR52E6Q96RD3 313 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 C20orf27Q9GZN8 174 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 HS3ST2Q9Y278 367 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 SBF1O95248 1867 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 MEGF8Q7Z7M0 2845 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR2T8A6NH00 312 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 PSMD12O00232 456 aaPredicted RBP0.08□□□□□ -2.4
PMS1-203ENST00000409593 CCL25O15444 150 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 CD79AP11912 226 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 TPM4P67936 248 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 C4orf3Q8WVX3 66 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 COMMD5Q9GZQ3 224 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 DCSTAMPQ9H295 470 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OR51V1Q9H2C8 321 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 OSTCQ9NRP0 149 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 EPDR1Q9UM22 224 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 CHCHD2Q9Y6H1 151 aaPredicted RBP0.08□□□□□ -2.4
PMS1-203ENST00000409593 V9GYY5 206 aaPredicted RBP0.08□□□□□ -2.4
PMS1-203ENST00000409593 ALPK3Q96L96 1907 aa0.08□□□□□ -2.4
PMS1-203ENST00000409593 MED1Q15648 1581 aaPredicted RBP0.07□□□□□ -2.4
PMS1-203ENST00000409593 CASP8AP2Q9UKL3 1982 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 ECM29Q5VYK3 1845 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 CNIH1O95406 144 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 AHSA1O95433 338 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 ZNF682O95780 498 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 IFNA10P01566 189 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 TNNC2P02585 160 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 TTRP02766 147 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 IFNA16P05015 189 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 PSME3P61289 254 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 IMPG1Q17R60 797 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 Q8IYB0 196 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 C8orf76Q96K31 380 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 CYSLTR1Q9Y271 337 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 PLXND1Q9Y4D7 1925 aa0.07□□□□□ -2.4
PMS1-203ENST00000409593 ARHGEF28Q8N1W1 1705 aaKnown RBP0.06□□□□□ -2.4
PMS1-203ENST00000409593 A0A087WUJ7 227 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 CLDN24A6NM45 220 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 RNASE4P34096 147 aaKnown RBP0.06□□□□□ -2.4
PMS1-203ENST00000409593 SULT1A1P50225 295 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 MAGOHP61326 146 aaKnown RBP0.06□□□□□ -2.4
PMS1-203ENST00000409593 ESRGQ1W209 222 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 C12orf74Q32Q52 190 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 BRMS1LQ5PSV4 323 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 SPOPLQ6IQ16 392 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 CLDN22Q8N7P3 220 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 MRPS26Q9BYN8 205 aaKnown RBP0.06□□□□□ -2.4
PMS1-203ENST00000409593 TMEM133Q9H2Q1 129 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 UCK1Q9HA47 277 aa0.06□□□□□ -2.4
PMS1-203ENST00000409593 PHRF1Q9P1Y6 1649 aaKnown RBP0.06□□□□□ -2.4
PMS1-203ENST00000409593 ZFYVE9O95405 1425 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 RIMBP3CA6NJZ7 1639 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 RIMBP3BA6NNM3 1639 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 RIMBP3Q9UFD9 1639 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 TRBV6-4A0A1B0GX49 114 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 CCL16O15467 120 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 CRYZL1O95825 349 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 SERPINA6P08185 405 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 OR4E1P0C645 316 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 SRIP30626 198 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 RANP62826 216 aaKnown RBP0.05□□□□□ -2.4
PMS1-203ENST00000409593 FAM74A1Q5RGS3 127 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 LCA10Q71F78 164 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 LINC00301Q8NCQ3 95 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 RNASE7Q9H1E1 156 aaKnown RBP0.05□□□□□ -2.4
PMS1-203ENST00000409593 TLNRD1Q9H1K6 362 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 VPS29Q9UBQ0 182 aa0.05□□□□□ -2.4
PMS1-203ENST00000409593 SLC35A3Q9Y2D2 325 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms