RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ACACBO00763 2458 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 CD59P13987 128 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 TP53TG3Q9ULZ0 132 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 TIMM9Q9Y5J7 89 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 PIGBOS1A0A0B4J2F0 54 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 CA7P43166 264 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 LBHQ53QV2 105 aaPredicted RBP6.8□□□□□ -1.32
SNX13-201ENST00000409076 ZADH2Q8N4Q0 377 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 RITA1Q96K30 269 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 SLC25A33Q9BSK2 321 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 FBXL15Q9H469 300 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
SNX13-201ENST00000409076 MRPL36Q9P0J6 103 aaKnown RBP6.8□□□□□ -1.32
SNX13-201ENST00000409076 TRAV17A0A0B4J275 112 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 TEX50A0A1B0GTY4 177 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 TMEM210A6NLX4 147 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 C15orf61A6NNL5 157 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 K7EMI3 77 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 AREGP15514 252 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 FCER1GP30273 86 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 GUCD1Q96NT3 240 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 CLEC7AQ9BXN2 247 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 A0A1W2PS18 150 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 NCBP2LA6PVI3 153 aaKnown RBP6.79□□□□□ -1.32
SNX13-201ENST00000409076 C10orf142B7Z368 130 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 DLEU1O43261 78 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 VENTXO95231 258 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 SP9P0CG40 484 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 ACP1P24666 158 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 ZBTB34Q8NCN2 500 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 RPUSD1Q9UJJ7 312 aaKnown RBP6.79□□□□□ -1.32
SNX13-201ENST00000409076 NKX6-3A6NJ46 265 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
SNX13-201ENST00000409076 ZNF207O43670 478 aaKnown RBP6.79□□□□□ -1.32
SNX13-201ENST00000409076 KRTAP27-1Q3LI81 207 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 MDS2Q8NDY4 140 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 TNFRSF19Q9NS68 423 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 ZFYVE26Q68DK2 2539 aa6.79□□□□□ -1.32
SNX13-201ENST00000409076 C21orf140B9A014 251 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 C15orf65H3BRN8 121 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 NUDT3O95989 172 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 P01737 135 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 FTH1P19P0C7X4 201 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 Q6ZS49 121 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 SRSF12Q8WXF0 261 aaKnown RBP6.78□□□□□ -1.32
SNX13-201ENST00000409076 CCDC168Q8NDH2 2452 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 TRGV8A0A0C4DH27 118 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 SPRY2O43597 315 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 COMPP49747 757 aaPredicted RBP6.78□□□□□ -1.32
SNX13-201ENST00000409076 ZNF474Q6S9Z5 364 aaPredicted RBP6.78□□□□□ -1.32
SNX13-201ENST00000409076 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 C22orf15Q8WYQ4 148 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 AP1S3Q96PC3 154 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 TMEM167BQ9NRX6 74 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 A0A087X0K7 114 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 KBTBD11-OT1A0A1B0GTJ5 212 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 M0R296 226 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 M0R3E3 92 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 ZNF324O75467 553 aaPredicted RBP6.78□□□□□ -1.32
SNX13-201ENST00000409076 AMY1AP04745 511 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 GPX1P07203 203 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 OR5AL1P0C617 328 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 CT45A6P0DMU7 189 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 CT45A5P0DMU8 189 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 CT45A7P0DMV0 189 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 VDAC2P45880 294 aaPredicted RBP6.78□□□□□ -1.32
SNX13-201ENST00000409076 LCN2P80188 198 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 TPTE2P1Q5T6R2 138 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 RUSC1-AS1Q66K80 236 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 Q6ZSR3 168 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 ZPBPQ9BS86 351 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 JPT1Q9UK76 154 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 V9GYV3 84 aa6.78□□□□□ -1.32
SNX13-201ENST00000409076 IGHV3OR16-10A0A075B7F0 116 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 SMKR1H3BMG3 65 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 NDUFB3O43676 98 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 PRSS3P2Q8NHM4 247 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 LINC01560Q8TB33 94 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 ZNF430Q9H8G1 570 aaPredicted RBP6.77□□□□□ -1.33
SNX13-201ENST00000409076 OR4C46A6NHA9 309 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 OR2J3O76001 311 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 IGHV1-46P01743 117 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 NHLH1Q02575 133 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 VWC2Q2TAL6 325 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 PRR30Q53SZ7 412 aaPredicted RBP6.77□□□□□ -1.33
SNX13-201ENST00000409076 BEND2Q8NDZ0 799 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 NUP35Q8NFH5 326 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 OR1L8Q8NGR8 309 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 SRRM5B3KS81 715 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 PEX7O00628 323 aa6.77□□□□□ -1.33
SNX13-201ENST00000409076 NMUP48645 174 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms