RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 KLF9Q13886 244 aaPredicted RBP14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 RNASEH2CQ8TDP1 164 aaKnown RBP14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 TRIM63Q969Q1 353 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 METTL26Q96S19 204 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 CSTL1Q9H114 145 aa14.19□□□□□ -0.14
SMARCB1-204ENST00000407422 JTBO76095 146 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 IGLC1P0CG04 106 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 PMS2P11Q13670 270 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 LEMD1Q68G75 181 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 TMEM231Q9H6L2 316 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 V9GYH0 126 aa14.18□□□□□ -0.14
SMARCB1-204ENST00000407422 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 A0A0B4J2A0 478 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 NPY1RP25929 384 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 DEFB131AP59861 70 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 RBMS2Q15434 407 aaKnown RBP14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 PYDC2Q56P42 97 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 SHPKQ9UHJ6 478 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 RABAC1Q9UI14 185 aa14.17□□□□□ -0.14
SMARCB1-204ENST00000407422 A0A1W2PS18 150 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 MPTX1A8MV57 137 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 SCGB2A1O75556 95 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 SLC25A4P12235 298 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 OR10J1P30954 320 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 P2RY1P47900 373 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 OR1S2Q8NGQ3 325 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 HSPB7Q9UBY9 170 aa14.16□□□□□ -0.14
SMARCB1-204ENST00000407422 TRAV2A0A0B4J234 112 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 CXorf65A6NEN9 183 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 CCDC160A6NGH7 325 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 CCR6P51684 374 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 SMCO1Q147U7 214 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 ZNF79Q15937 498 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 TMED4Q7Z7H5 227 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 STXBP6Q8NFX7 210 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 NPIPB3Q92617 1050 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 RBKSQ9H477 322 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 LGI3Q8N145 548 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 TOMM5Q8N4H5 51 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 Q8WTZ3 238 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 ACY3Q96HD9 319 aa14.15□□□□□ -0.14
SMARCB1-204ENST00000407422 K7EQG2 157 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 IFNA10P01566 189 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 ANXA3P12429 323 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 FAUP35544 74 aaKnown RBP14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 YPEL3P61236 119 aaPredicted RBP14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 DTD1Q8TEA8 209 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 U3KQE9 123 aa14.14□□□□□ -0.15
SMARCB1-204ENST00000407422 USF2Q15853 346 aaPredicted RBP14.13□□□□□ -0.15
SMARCB1-204ENST00000407422 ETFRF1Q6IPR1 90 aa14.13□□□□□ -0.15
SMARCB1-204ENST00000407422 NARS2Q96I59 477 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-204ENST00000407422 RBM38Q9H0Z9 239 aaKnown RBP14.13□□□□□ -0.15
SMARCB1-204ENST00000407422 U3KQ87 197 aa14.13□□□□□ -0.15
SMARCB1-204ENST00000407422 CA1P00915 261 aaPredicted RBP14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 AP3S2P59780 193 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 SRPXP78539 464 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 NOXA1Q86UR1 476 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 DCANP1Q8TF63 244 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 RARRES2Q99969 163 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 IL4P05112 153 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 HNRNPCP07910 306 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■□□□□ 9.1
SMARCB1-204ENST00000407422 ZNF688P0C7X2 276 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 S100A5P33763 92 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 TMEM128Q5BJH2 165 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 CCDC190Q86UF4 302 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 OR11H2Q8NH07 326 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 OR1S1Q8NH92 325 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 GATAD1Q8WUU5 269 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 GRAMD2BQ96HH9 432 aa14.12□□□□□ -0.15
SMARCB1-204ENST00000407422 KMT2AQ03164 3969 aa14.11□□□□□ -0.15
SMARCB1-204ENST00000407422 ATF4P18848 351 aaPredicted RBP14.11□□□□□ -0.15
SMARCB1-204ENST00000407422 C16orf54Q6UWD8 224 aa14.11□□□□□ -0.15
SMARCB1-204ENST00000407422 GLMPQ8WWB7 406 aa14.11□□□□□ -0.15
SMARCB1-204ENST00000407422 NUPR2A6NF83 97 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 PITX3O75364 302 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 TOMM40O96008 361 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 IFNA4P05014 189 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 RD3LP0DJH9 198 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 VAMP1P23763 118 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 CEMP1Q6PRD7 247 aaPredicted RBP14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 STHQ8IWL8 128 aa14.1□□□□□ -0.15
SMARCB1-204ENST00000407422 KNCNA6PVL3 124 aa14.09□□□□□ -0.15
SMARCB1-204ENST00000407422 PSG1P11464 419 aa14.09□□□□□ -0.15
SMARCB1-204ENST00000407422 DHRS2Q13268 280 aa14.09□□□□□ -0.15
SMARCB1-204ENST00000407422 TMEM217Q8N7C4 229 aa14.09□□□□□ -0.15
SMARCB1-204ENST00000407422 HELTA6NFD8 242 aa14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 GIG44P09565 113 aaPredicted RBP14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 TRPT1Q86TN4 253 aaKnown RBP14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 LINC00476Q8WZB0 136 aa14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 PPP1R14BQ96C90 147 aa14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 SLC25A21Q9BQT8 299 aaPredicted RBP14.08□□□□□ -0.15
SMARCB1-204ENST00000407422 DUXBA0A1W2PPF3 345 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 DEFB4AO15263 64 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 IAPPP10997 89 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 PPP1R1AQ13522 171 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 GAMTQ14353 236 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 LRTM2Q8N967 370 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 OR51G1Q8NGK1 321 aa14.08□□□□□ -0.16
SMARCB1-204ENST00000407422 IGKV1D-37A0A075B6S9 117 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms