RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.15
MSH2-202ENST00000406134 C19orf24Q9BVV8 132 aa7.9□□□□□ -1.15
MSH2-202ENST00000406134 OR7C2O60412 319 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 RAB31Q13636 194 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 TMEM155Q4W5P6 130 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 MS4A10Q96PG2 267 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 MRPL32Q9BYC8 188 aaKnown RBP7.89□□□□□ -1.15
MSH2-202ENST00000406134 GAL3ST2Q9H3Q3 398 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 ZNF355PQ9NSJ1 428 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 TCRBV4S1A1TA0A5B7 111 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 TCF21O43680 179 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 SPINK4O60575 86 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 REG1AP05451 166 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 SLAQ13239 276 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 PRR30Q53SZ7 412 aaPredicted RBP7.89□□□□□ -1.15
MSH2-202ENST00000406134 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
MSH2-202ENST00000406134 PDPNQ86YL7 162 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 C22orf15Q8WYQ4 148 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 CDC42EP3Q9UKI2 254 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 FCN1O00602 326 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 MT-CO2P00403 227 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 CRISP2P16562 243 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 USF1P22415 310 aaPredicted RBP7.89□□□□□ -1.15
MSH2-202ENST00000406134 CTRLP40313 264 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 WFDC8Q8IUA0 241 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 OR4A5Q8NH83 315 aa7.89□□□□□ -1.15
MSH2-202ENST00000406134 PCNX1Q96RV3 2341 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TRBV9A0A0B4J1U6 114 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TCL1AP56279 114 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 PRB3Q04118 309 aaPredicted RBP7.88□□□□□ -1.15
MSH2-202ENST00000406134 KIAA1644Q3SXP7 199 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 FBLN7Q53RD9 439 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TMEM108Q6UXF1 575 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 NIT1Q86X76 327 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 OR4C13Q8NGP0 309 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 NPIPB3Q92617 1050 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 FLYWCH2Q96CP2 140 aaKnown RBP7.88□□□□□ -1.15
MSH2-202ENST00000406134 TBX15Q96SF7 602 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 KAAG1Q9UBP8 84 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 A0A1W2PS18 150 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 CBY3A6NI87 242 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 E7EQL1 145 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 CORTO00230 105 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 CRYABP02511 175 aaKnown RBP7.88□□□□□ -1.15
MSH2-202ENST00000406134 GPX1P07203 203 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TNFSF4P23510 183 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 LDLRAD2Q5SZI1 272 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 DNAJC4Q9NNZ3 241 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 PPIAL4EA0A075B759 164 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 NKX6-3A6NJ46 265 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 PPIAL4DF5H284 164 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 C16orf97H3BN30 126 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 SCGB1D1O95968 90 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 PPIAL4FP0DN26 164 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 IGHV1-8P0DP01 117 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 GNG5P63218 68 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 IBA57Q5T440 356 aaKnown RBP7.88□□□□□ -1.15
MSH2-202ENST00000406134 HSPB9Q9BQS6 159 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 SAP30LQ9HAJ7 183 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 PPIAL4AQ9Y536 164 aa7.88□□□□□ -1.15
MSH2-202ENST00000406134 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 ZNF785A8K8V0 405 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 FAM231DQ6ZW35 169 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
MSH2-202ENST00000406134 ABHD17AQ96GS6 310 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 PKDREJQ9NTG1 2253 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 TEX22C9J3V5 150 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 IGLV1-47P01700 117 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 TNFRSF1AP19438 455 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
MSH2-202ENST00000406134 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 RNASE6Q93091 150 aaKnown RBP7.87□□□□□ -1.15
MSH2-202ENST00000406134 C20orf144Q9BQM9 153 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 MLST8Q9BVC4 326 aa7.87□□□□□ -1.15
MSH2-202ENST00000406134 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
MSH2-202ENST00000406134 SIAH2O43255 324 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 SLC25A17O43808 307 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 IRF2P14316 349 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 GP9P14770 177 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 BATFQ16520 125 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 OR10J3Q5JRS4 329 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 COMMD5Q9GZQ3 224 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 RPH3ALQ9UNE2 315 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 M0R143 59 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 KLK10O43240 276 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 MOSP00540 346 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 PLAUP00749 431 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 APOA2P02652 100 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 SELENOVP59797 346 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 CCL17Q92583 94 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 TMEM186Q96B77 213 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 SH3BGRL2Q9UJC5 107 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 WASHC3Q9Y3C0 194 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 A0A1B0GXF2 115 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 IZUMO1RA6ND01 250 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 PEX7O00628 323 aa7.86□□□□□ -1.15
MSH2-202ENST00000406134 AMY1AP04745 511 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms