RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 GPR137BO60478 399 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 FAM106CPP0CH98 169 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 PET100P0DJ07 73 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 P2RY1P47900 373 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 RPL23AP62750 156 aaKnown RBP9.24□□□□□ -0.93
SKA3-203ENST00000400018 GCSAMLQ5JQS6 135 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 FAM71F2Q6NXP2 309 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 Q8N6K4 173 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 P2RX4Q99571 388 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 FNDC4Q9H6D8 234 aaPredicted RBP9.24□□□□□ -0.93
SKA3-203ENST00000400018 IGLC7A0M8Q6 106 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 LINC00614P0C842 121 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 EGR2P11161 476 aaPredicted RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 SRP14P37108 136 aaKnown RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 CD81P60033 236 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 PRCDQ00LT1 54 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 POU2AF1Q16633 256 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 DNLZQ5SXM8 178 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 CCDC144NLQ6NUI1 221 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 TMEM182Q6ZP80 229 aaPredicted RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 TCTEX1D1Q8N7M0 179 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 STRAPQ9Y3F4 350 aaKnown RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 FGF7P21781 194 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 SNCAP37840 140 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 LGALS7P47929 136 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 COMPP49747 757 aaPredicted RBP9.23□□□□□ -0.93
SKA3-203ENST00000400018 SLC38A11Q08AI6 406 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ZNF343Q6P1L6 599 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 SLC24A4Q8NFF2 622 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ACY3Q96HD9 319 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ENY2Q9NPA8 101 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ESM1Q9NQ30 184 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ZNF355PQ9NSJ1 428 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 PRNDQ9UKY0 176 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 URGCP-MRPS24S4R325 110 aa9.23□□□□□ -0.93
SKA3-203ENST00000400018 ZNF727A8MUV8 499 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 GZMBP10144 247 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 NPY1RP25929 384 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 ELLP55199 621 aaPredicted RBP9.22□□□□□ -0.93
SKA3-203ENST00000400018 ARSJQ5FYB0 599 aaPredicted RBP9.22□□□□□ -0.93
SKA3-203ENST00000400018 SLC25A24Q6NUK1 477 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 ZNF429Q86V71 674 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 HIPK2Q9H2X6 1198 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 M0R143 59 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 TRGC2P03986 189 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 CXCL1P09341 107 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 RNASE2P10153 161 aaKnown RBP9.22□□□□□ -0.93
SKA3-203ENST00000400018 SLC25A6P12236 298 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 BRS3P32247 399 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 BTNL8Q6UX41 500 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 TMEM14EPQ6UXP3 125 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 C11orf44Q8N8P7 122 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 SAT2Q96F10 170 aaPredicted RBP9.22□□□□□ -0.93
SKA3-203ENST00000400018 RAB40CQ96S21 281 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 RASL11BQ9BPW5 248 aa9.22□□□□□ -0.93
SKA3-203ENST00000400018 IGKV1OR2-108A0A075B7D4 117 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 RBX1P62877 108 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 LRRC75BQ2VPJ9 315 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 YPEL4Q96NS1 127 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 OR5B12Q96R08 314 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 VWFP04275 2813 aa9.21□□□□□ -0.93
SKA3-203ENST00000400018 TCF21O43680 179 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 NDUFA3O95167 84 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 GAGE1Q13065 139 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 Q6ZRG5 221 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 MMD2Q8IY49 270 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 TEX45Q8NA69 505 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
SKA3-203ENST00000400018 WNT10AQ9GZT5 417 aa9.21□□□□□ -0.94
SKA3-203ENST00000400018 FBN1P35555 2871 aaKnown RBP9.21□□□□□ -0.94
SKA3-203ENST00000400018 ATP6V0CP27449 155 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 MAS1LP35410 378 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 OPRK1P41145 380 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 IER3P46695 156 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 EIF5A2Q9GZV4 153 aaKnown RBP9.2□□□□□ -0.94
SKA3-203ENST00000400018 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
SKA3-203ENST00000400018 A0A1W2PN81 502 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 OR2J3O76001 311 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 CHRNA7P36544 502 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 BAXQ07812 192 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 JOSD1Q15040 202 aaPredicted RBP9.2□□□□□ -0.94
SKA3-203ENST00000400018 RHEBQ15382 184 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 NPBQ8NG41 125 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 Q8WTZ3 238 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 ARPC1AQ92747 370 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 MEGF9Q9H1U4 602 aa9.2□□□□□ -0.94
SKA3-203ENST00000400018 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
SKA3-203ENST00000400018 FSHBP01225 129 aa9.19□□□□□ -0.94
SKA3-203ENST00000400018 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms