RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SLAQ13239 276 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 CALYQ9NYX4 217 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 PDCD1Q15116 288 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
CACNA1C-220ENST00000399655 CFHR1Q03591 330 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 DEFB125Q8N687 156 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 TMEM141Q96I45 108 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 LHX9Q9NQ69 397 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 A0A1W2PRE2 83 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 TGIF1Q15583 401 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 DOT1LQ8TEK3 1739 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 B5MCH6 92 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 C8orf44Q96CB5 159 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 GP6Q9HCN6 339 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 LCTP09848 1927 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 PDE6GP18545 87 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 PARP14Q460N5 1801 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 SERP1Q9Y6X1 66 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 H3BMG7 143 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 ZC3H3Q8IXZ2 948 aaKnown RBP7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 LMO7DNF2Z398 122 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 RPS27P42677 84 aaKnown RBP7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 CCL20P78556 96 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 SOCS1O15524 211 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 TRPT1Q86TN4 253 aaKnown RBP7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 C12orf76Q8N812 135 aaPredicted RBP7.25□□□□□ -1.25
CACNA1C-220ENST00000399655 VSIG10L2P0DP72 767 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 ZP4Q12836 540 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 C1orf194Q5T5A4 169 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 SRSF2Q01130 221 aaKnown RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 DCAF12L2Q5VW00 463 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 ZNF784Q8NCA9 323 aaPredicted RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 ATP5J2P56134 94 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 TCF19Q9Y242 345 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 TRAV3A0A0B4J244 114 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 DLL3Q9NYJ7 618 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 TCF15Q12870 199 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 ZFP2Q6ZN57 461 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 CEP192Q8TEP8 1941 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 NDUFC1O43677 76 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 C1orf159Q96HA4 380 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 TSSC4Q9Y5U2 329 aaPredicted RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 AZU1P20160 251 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 ZNF660Q6AZW8 331 aaPredicted RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 C3orf22Q8N5N4 141 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 SMRP1Q8NCR6 262 aa7.24□□□□□ -1.25
CACNA1C-220ENST00000399655 IGHV3OR15-7A0A075B7D8 119 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 FOXL1Q12952 345 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 C10orf105Q8TEF2 133 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 LINC00615Q96LM1 132 aaPredicted RBP7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 PILRBQ9UKJ0 227 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 PROB1E7EW31 1015 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 CELA3AP09093 270 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 COX5BP10606 129 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 PYY3Q5JQD4 70 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 C1QL4Q86Z23 238 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 ZIC4Q8N9L1 334 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 CCL21O00585 134 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 A0A0A6YYD5 115 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 ACP7Q6ZNF0 438 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 BTAF1O14981 1849 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 IL25Q9H293 177 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 SUPT4H1P63272 117 aaKnown RBP7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 XAF1Q6GPH4 301 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 VSIG2Q96IQ7 327 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 BADQ92934 168 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 MRPL27Q9P0M9 148 aaKnown RBP7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 ZNF236Q9UL36 1845 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 A6NED7 52 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 CFPP27918 469 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 GFERP55789 205 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 PRO1854Q9UHT4 67 aa7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 AJAP1Q9UKB5 411 aaPredicted RBP7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 DMKNQ6E0U4 476 aaPredicted RBP7.23□□□□□ -1.25
CACNA1C-220ENST00000399655 BTCP35070 178 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 C1orf210Q8IVY1 113 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 CARD19Q96LW7 228 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 R3HDMLQ9H3Y0 253 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 PDFQ9HBH1 243 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 DENND4CQ5VZ89 1909 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 TNRC6BQ9UPQ9 1833 aaKnown RBP7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 REG1AP05451 166 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 CLPSP04118 112 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 FAM166AQ6J272 317 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 ELSPBP1Q96BH3 223 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 RCHY1Q96PM5 261 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 WNK3Q9BYP7 1800 aa7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 CNRIP1Q96F85 164 aaPredicted RBP7.22□□□□□ -1.25
CACNA1C-220ENST00000399655 NEURL4Q96JN8 1562 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms