RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 MBNL2Q5VZF2 373 aaKnown RBP11.33□□□□□ -0.6
APOB-202ENST00000399256 C10orf113Q5VZT2 155 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
APOB-202ENST00000399256 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 SPRY3O43610 288 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 PSG1P11464 419 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 DEFB124Q8NES8 71 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 BLNKQ8WV28 456 aa11.33□□□□□ -0.6
APOB-202ENST00000399256 ZNF137PP52743 207 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 C7orf69Q9H7B7 122 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 KIR2DL2P43627 348 aaPredicted RBP11.32□□□□□ -0.6
APOB-202ENST00000399256 HBBP68871 147 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 ZNF714Q96N38 554 aa11.32□□□□□ -0.6
APOB-202ENST00000399256 TIMM8BQ9Y5J9 83 aaPredicted RBP11.32□□□□□ -0.6
APOB-202ENST00000399256 E7EUB6 86 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 VHLLQ6RSH7 139 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 LINC00322Q6ZN03 302 aaPredicted RBP11.31□□□□□ -0.6
APOB-202ENST00000399256 FXYD5Q96DB9 178 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 PGLYRP4Q96LB8 373 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 ZNF292O60281 2723 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 DLL1O00548 723 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
APOB-202ENST00000399256 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 ITLN1Q8WWA0 313 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 NPIPB3Q92617 1050 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 VPS25Q9BRG1 176 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 ZNF138P52744 262 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
APOB-202ENST00000399256 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 AMMECR1LQ6DCA0 310 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
APOB-202ENST00000399256 DSCAMO60469 2012 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 KNTC1P50748 2209 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 RHOGP84095 191 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 DMXL1Q9Y485 3027 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 ARFGEF3Q5TH69 2177 aa11.3□□□□□ -0.6
APOB-202ENST00000399256 SPAARA0A1B0GVQ0 90 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 H3BTX0 84 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 MOSP00540 346 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 C10orf55Q5SWW7 151 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 HARBI1Q96MB7 349 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 EPDR1Q9UM22 224 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 PGPA6NDG6 321 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 IGLV1-44P01699 117 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 BPIFB3P59826 476 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 PDPNQ86YL7 162 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 OR1L4Q8NGR5 311 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 FER1L6-AS2Q96M78 137 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 A0A087X0K7 114 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
APOB-202ENST00000399256 GUSBP1Q15486 140 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 TMEM178AQ8NBL3 297 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 CCL13Q99616 98 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 NDUFA4L2Q9NRX3 87 aa11.29□□□□□ -0.6
APOB-202ENST00000399256 ORM2P19652 201 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 REG1BP48304 166 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
APOB-202ENST00000399256 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 CADP27708 2225 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 LHBP01229 141 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 CFHR2P36980 270 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms