RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ASCL2Q99929 193 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 DOPEY2Q9Y3R5 2298 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 A0A1W2PPI3 338 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 CYB5BO43169 146 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 CA2P00918 260 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 NBEAP1P0C6P0 100 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 PRTN3P24158 256 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 CD24P25063 80 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 ELLP55199 621 aaPredicted RBP12.16□□□□□ -0.46
COL25A1-201ENST00000399126 CCL20P78556 96 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 RPL19P84098 196 aaKnown RBP12.16□□□□□ -0.46
COL25A1-201ENST00000399126 PRCDQ00LT1 54 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 TMEM147Q9BVK8 224 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 A0A1B0GW64 132 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 M0R1W7 72 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 COL8A1P27658 744 aa12.16□□□□□ -0.46
COL25A1-201ENST00000399126 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
COL25A1-201ENST00000399126 PINX1Q96BK5 328 aaKnown RBP12.16□□□□□ -0.46
COL25A1-201ENST00000399126 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
COL25A1-201ENST00000399126 CGB1A6NKQ9 187 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 TSPAN15O95858 294 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 OR11H6Q8NGC7 330 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 RPRMQ9NS64 109 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 A0A087WWC5 75 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 TIMM23O14925 209 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 TMEM167AQ8TBQ9 72 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 APCP25054 2843 aa12.15□□□□□ -0.46
COL25A1-201ENST00000399126 ODF3BA8MYP8 253 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 DEFA4P12838 97 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 NPY1RP25929 384 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 HTR1DP28221 377 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 PDLIM4P50479 330 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 UBE2V1Q13404 147 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 BATFQ16520 125 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 ACSM6Q6P461 480 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 SPSB3Q6PJ21 355 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
COL25A1-201ENST00000399126 IGHV2-70DA0A0C4DH43 119 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
COL25A1-201ENST00000399126 SNCAP37840 140 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 OR2D3Q8NGH3 330 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
COL25A1-201ENST00000399126 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 APELAP0DMC3 54 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 USF1P22415 310 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 ZNF343Q6P1L6 599 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 DPM3Q9P2X0 92 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 TFPI2P48307 235 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 RAB11AP62491 216 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 FAM168AQ92567 244 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
COL25A1-201ENST00000399126 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
COL25A1-201ENST00000399126 IGHV4-30-2A0A087WSY4 118 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 PSG5Q15238 335 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 MLANAQ16655 118 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 OR1P1Q8NH06 330 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 SLC35E1Q96K37 410 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 AURKAIP1Q9NWT8 199 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-201ENST00000399126 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 ZNF727A8MUV8 499 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 SNAI2O43623 268 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 REG1AP05451 166 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 C19orf35Q6ZS72 473 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 TBX15Q96SF7 602 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 FKBP11Q9NYL4 201 aa12.12□□□□□ -0.47
COL25A1-201ENST00000399126 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms