RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 LYPD6Q86Y78 171 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 REG1AP05451 166 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 LINC00205P59089 165 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 FOXF2Q12947 444 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 NHP2Q9NX24 153 aaKnown RBP12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 JPT1Q9UK76 154 aa12.09□□□□□ -0.47
RPRD1A-202ENST00000399022 A0A1B0GUT8 65 aa12.08□□□□□ -0.47
RPRD1A-202ENST00000399022 IGLL1P15814 213 aa12.08□□□□□ -0.47
RPRD1A-202ENST00000399022 ANOS1P23352 680 aa12.08□□□□□ -0.47
RPRD1A-202ENST00000399022 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.47
RPRD1A-202ENST00000399022 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 PSG9Q00887 426 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 MGST2Q99735 147 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 GP6Q9HCN6 339 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 A0A0G2JLM5 398 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 RBPMS2Q6ZRY4 209 aaKnown RBP12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 DPF1Q92782 380 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 GPR82Q96P67 336 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 CD5LO43866 347 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 ZCCHC24Q8N2G6 241 aaKnown RBP12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 RAB1CQ92928 201 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 INSIG2Q9Y5U4 225 aa12.08□□□□□ -0.48
RPRD1A-202ENST00000399022 J3QW42 95 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 SRSF7Q16629 238 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 OR5A1Q8NGJ0 315 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 PSPNO60542 156 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 ZNF138P52744 262 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 ZNF502Q8TBZ5 544 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 PDLIM4P50479 330 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 MED13Q9UHV7 2174 aa12.07□□□□□ -0.48
RPRD1A-202ENST00000399022 SH2D7A6NKC9 451 aaPredicted RBP12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 IQCF6A8MYZ5 107 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 MBNL2Q5VZF2 373 aaKnown RBP12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 FOXL2NBQ6ZUU3 175 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 WDR31Q8NA23 367 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 OR9G1Q8NH87 305 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 C18orf32Q8TCD1 76 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 ZNF714Q96N38 554 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 PRELID3AQ96N28 172 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 ESDP10768 282 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 CACNG7P62955 275 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 MS4A6AQ9H2W1 248 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 PAX2Q02962 417 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 PEAR1Q5VY43 1037 aaPredicted RBP12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 ASCL4Q6XD76 172 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
RPRD1A-202ENST00000399022 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 GLRXP35754 106 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 RNFT1Q5M7Z0 435 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 WDR82Q6UXN9 313 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 OR1N2Q8NGR9 330 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.482e-15■■■■■ 72.5
RPRD1A-202ENST00000399022 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 NUP35Q8NFH5 326 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 SCNM1Q9BWG6 230 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 AREGP15514 252 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
RPRD1A-202ENST00000399022 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 SFTA2Q6UW10 78 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 Q6ZS49 121 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 LINC00479Q96M42 142 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 SOX21Q9Y651 276 aaPredicted RBP12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 FAM231BA6NCW3 169 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 H7C2G1 150 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 RPL27AP46776 148 aaKnown RBP12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 ZNF418Q8TF45 676 aaPredicted RBP12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 IDI2-AS1Q9NZ38 188 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 LY96Q9Y6Y9 160 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
RPRD1A-202ENST00000399022 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
RPRD1A-202ENST00000399022 A6NJY4 79 aa12.03□□□□□ -0.48
RPRD1A-202ENST00000399022 LMO1P25800 156 aa12.03□□□□□ -0.48
RPRD1A-202ENST00000399022 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
RPRD1A-202ENST00000399022 OR4X2Q8NGF9 303 aa12.03□□□□□ -0.48
RPRD1A-202ENST00000399022 OR52E5Q8NH55 327 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms