RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TOMM5Q8N4H5 51 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 METTL26Q96S19 204 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 SHPKQ9UHJ6 478 aa9.92□□□□□ -0.82
VCX3A-202ENST00000398729 DNASE2O00115 360 aaPredicted RBP9.91□□□□□ -0.82
VCX3A-202ENST00000398729 DFFBO76075 338 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 NPY1RP25929 384 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 CCR6P51684 374 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
VCX3A-202ENST00000398729 KLF9Q13886 244 aaPredicted RBP9.91□□□□□ -0.82
VCX3A-202ENST00000398729 NMSQ5H8A3 153 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 LGI3Q8N145 548 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 LILRB2Q8N423 598 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 TRIM63Q969Q1 353 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 NARS2Q96I59 477 aaKnown RBP9.91□□□□□ -0.82
VCX3A-202ENST00000398729 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 MAP6D1Q9H9H5 199 aa9.91□□□□□ -0.82
VCX3A-202ENST00000398729 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 TRAV2A0A0B4J234 112 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 RND2P52198 227 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 TNFRSF9Q07011 255 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 SMCO1Q147U7 214 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 ZNF124Q15973 351 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 TIGITQ495A1 244 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 PRSS54Q6PEW0 395 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 LYZL2Q7Z4W2 148 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 TMED4Q7Z7H5 227 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 OR1S2Q8NGQ3 325 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 Q8WTZ3 238 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 RNF183Q96D59 192 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 U3KQ87 197 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 V9GYH0 126 aa9.9□□□□□ -0.82
VCX3A-202ENST00000398729 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 JTBO76095 146 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 IFNA10P01566 189 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 IGLC1P0CG04 106 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 CRYBB3P26998 211 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 OR10J1P30954 320 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 P2RY1P47900 373 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 ZNF79Q15937 498 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 TMEM128Q5BJH2 165 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 LYG2Q86SG7 212 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 DEDD2Q8WXF8 326 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 GRAMD2BQ96HH9 432 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 CSTL1Q9H114 145 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 HSPB7Q9UBY9 170 aa9.89□□□□□ -0.83
VCX3A-202ENST00000398729 DUXBA0A1W2PPF3 345 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 MPTX1A8MV57 137 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 EIF2B2P49770 351 aaKnown RBP9.88□□□□□ -0.83
VCX3A-202ENST00000398729 DEFB131AP59861 70 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
VCX3A-202ENST00000398729 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 DTD1Q8TEA8 209 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 TMEM170AQ8WVE7 144 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 SLC25A21Q9BQT8 299 aaPredicted RBP9.88□□□□□ -0.83
VCX3A-202ENST00000398729 RBKSQ9H477 322 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 RABAC1Q9UI14 185 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
VCX3A-202ENST00000398729 ZNF701M0R085 212 aaPredicted RBP9.87□□□□□ -0.83
VCX3A-202ENST00000398729 HNRNPCP07910 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
VCX3A-202ENST00000398729 VAMP1P23763 118 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 ATP5IP56385 69 aaPredicted RBP9.87□□□□□ -0.83
VCX3A-202ENST00000398729 SPANXN2Q5MJ10 180 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 CCDC190Q86UF4 302 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 STXBP6Q8NFX7 210 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 ACY3Q96HD9 319 aa9.87□□□□□ -0.83
VCX3A-202ENST00000398729 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
VCX3A-202ENST00000398729 CXorf65A6NEN9 183 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 K7EQG2 157 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 TOMM40O96008 361 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 IFNA4P05014 189 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 ATF4P18848 351 aaPredicted RBP9.86□□□□□ -0.83
VCX3A-202ENST00000398729 RBMS2Q15434 407 aaKnown RBP9.86□□□□□ -0.83
VCX3A-202ENST00000398729 LEMD1Q68G75 181 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 TMEM217Q8N7C4 229 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 GATAD1Q8WUU5 269 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 U3KQE9 123 aa9.86□□□□□ -0.83
VCX3A-202ENST00000398729 HELTA6NFD8 242 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 IL4P05112 153 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 RD3LP0DJH9 198 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 AP2S1P53680 142 aaPredicted RBP9.85□□□□□ -0.83
VCX3A-202ENST00000398729 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 STHQ8IWL8 128 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 CENPSQ8N2Z9 138 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
VCX3A-202ENST00000398729 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 PITX3O75364 302 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 MED6O75586 246 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 SFT2D2O95562 160 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
VCX3A-202ENST00000398729 SLC25A6P12236 298 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 GPX4P36969 197 aaPredicted RBP9.84□□□□□ -0.83
VCX3A-202ENST00000398729 INPP1P49441 399 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 USF2Q15853 346 aaPredicted RBP9.84□□□□□ -0.83
VCX3A-202ENST00000398729 C16orf54Q6UWD8 224 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 DCANP1Q8TF63 244 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms