RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ARL16Q0P5N6 197 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 DCTN2Q13561 401 aaKnown RBP11.91□□□□□ -0.5
MBD1-207ENST00000398488 RAB32Q13637 225 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
MBD1-207ENST00000398488 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
MBD1-207ENST00000398488 IGHV3-49A0A0A0MS15 119 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 YIF1AO95070 293 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 GPX4P36969 197 aaPredicted RBP11.91□□□□□ -0.5
MBD1-207ENST00000398488 TMEM14EPQ6UXP3 125 aa11.91□□□□□ -0.5
MBD1-207ENST00000398488 ZNF256Q9Y2P7 627 aaPredicted RBP11.91□□□□□ -0.5
MBD1-207ENST00000398488 STRAPQ9Y3F4 350 aaKnown RBP11.91□□□□□ -0.5
MBD1-207ENST00000398488 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 APOHP02749 345 aaPredicted RBP11.9□□□□□ -0.5
MBD1-207ENST00000398488 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 OR10J1P30954 320 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 RAB11AP62491 216 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 RELQ04864 619 aaPredicted RBP11.9□□□□□ -0.5
MBD1-207ENST00000398488 BTNL8Q6UX41 500 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
MBD1-207ENST00000398488 SORL1Q92673 2214 aa11.9□□□□□ -0.51
MBD1-207ENST00000398488 DNAH9Q9NYC9 4486 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 ZNF785A8K8V0 405 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 SSNA1O43805 119 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 LY86O95711 162 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 ELLP55199 621 aaPredicted RBP11.89□□□□□ -0.51
MBD1-207ENST00000398488 OR8G2PQ6IF36 304 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
MBD1-207ENST00000398488 DAZ1Q9NQZ3 744 aaKnown RBP11.89□□□□□ -0.51
MBD1-207ENST00000398488 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 H0YIZ8 118 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 K7EMT4 169 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 GP9P14770 177 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 TAS2R30P59541 319 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 S100A10P60903 97 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 ZNF90Q03938 601 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 OXA1LQ15070 435 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 ACOT7LQ6ZUV0 252 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
MBD1-207ENST00000398488 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
MBD1-207ENST00000398488 TSC22D2O75157 780 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
MBD1-207ENST00000398488 CXCL3P19876 107 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
MBD1-207ENST00000398488 RGS21Q2M5E4 152 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 Q8N1Y9 231 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 MRAPQ8TCY5 172 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 MGAT4CQ9UBM8 478 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
MBD1-207ENST00000398488 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
MBD1-207ENST00000398488 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 IGHV3-66A0A0C4DH42 116 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 IGHV7-4-1A0A0J9YVY3 117 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 CHEK1O14757 476 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
MBD1-207ENST00000398488 RRAS2P62070 204 aaPredicted RBP11.86□□□□□ -0.51
MBD1-207ENST00000398488 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
MBD1-207ENST00000398488 OR5AC2Q9NZP5 309 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 IGSF23A1L1A6 192 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 PSG1P11464 419 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 FCN2Q15485 313 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
MBD1-207ENST00000398488 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 RNF2Q99496 336 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 NMES1Q9C002 83 aa11.86□□□□□ -0.51
MBD1-207ENST00000398488 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
MBD1-207ENST00000398488 TRAV14DV4A0A0A6YYC5 116 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 L7N2F9 121 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 TOMM40O96008 361 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 VAMP2P63027 116 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 OR2F1Q13607 317 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 DEFB121Q5J5C9 76 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 OR11H7Q8NGC8 314 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 ST8SIA2Q92186 375 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 RNF126Q9BV68 326 aa11.85□□□□□ -0.51
MBD1-207ENST00000398488 ZFP92A6NM28 416 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 DEDDO75618 318 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 CST7O76096 145 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 RD3LP0DJH9 198 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 GATA2P23769 480 aaPredicted RBP11.84□□□□□ -0.51
MBD1-207ENST00000398488 BCAP31P51572 246 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 CAV2P51636 162 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 OR2K2Q8NGT1 345 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 Q8WTZ3 238 aa11.84□□□□□ -0.51
MBD1-207ENST00000398488 IL4P05112 153 aa11.83□□□□□ -0.52
MBD1-207ENST00000398488 CD7P09564 240 aa11.83□□□□□ -0.52
MBD1-207ENST00000398488 GUCA2BQ16661 112 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms