RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 FOXA2Q9Y261 457 aaPredicted RBP9.15□□□□□ -0.94
HPS4-202ENST00000398145 TRAV5A0A0B4J249 113 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 SPAARA0A1B0GVQ0 90 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 IGKV1D-33P01593 117 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 IGKV1-33P01594 117 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
HPS4-202ENST00000398145 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 MBNL3Q9NUK0 354 aaKnown RBP9.15□□□□□ -0.94
HPS4-202ENST00000398145 CRIM1Q9NZV1 1036 aa9.15□□□□□ -0.94
HPS4-202ENST00000398145 IGHV1-69-2A0A0G2JMI3 117 aa9.15□□□□□ -0.95
HPS4-202ENST00000398145 ZFP36L1Q07352 338 aaKnown RBP9.15□□□□□ -0.95
HPS4-202ENST00000398145 MPV17L2Q567V2 206 aa9.15□□□□□ -0.95
HPS4-202ENST00000398145 KLK15Q9H2R5 256 aa9.15□□□□□ -0.95
HPS4-202ENST00000398145 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.95
HPS4-202ENST00000398145 MUC21A0A0G2JKD1 596 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 MUC21A0A140T8X8 626 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 CGB1A6NKQ9 187 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 MUC21Q5SSG8 566 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 SRRM5B3KS81 715 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 ATP5LO75964 103 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 B3GALT5-AS1P59052 145 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 LINC00205P59089 165 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 YPEL3P61236 119 aaPredicted RBP9.14□□□□□ -0.95
HPS4-202ENST00000398145 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 PLXNB3Q9ULL4 1909 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 PPIAL4CA0A0B4J2A2 164 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 IGLV3-1P01715 115 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 PPIAL4GP0DN37 164 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 CDKN1AP38936 164 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
HPS4-202ENST00000398145 FOXI3A8MTJ6 420 aaPredicted RBP9.13□□□□□ -0.95
HPS4-202ENST00000398145 IL18BPO95998 194 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 IGKV1-39P01597 117 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 IGKV1D-39P04432 117 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 FDCSPQ8NFU4 85 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 OR10W1Q8NGF6 305 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 MEGF9Q9H1U4 602 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 PCNX1Q96RV3 2341 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 NPSP0C0P6 89 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 RAB9AP51151 201 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 COQ2Q96H96 371 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 C16orf92Q96LL3 132 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 MRPS16Q9Y3D3 137 aaKnown RBP9.13□□□□□ -0.95
HPS4-202ENST00000398145 SS18L1O75177 396 aaPredicted RBP9.13□□□□□ -0.95
HPS4-202ENST00000398145 CCL3L1P16619 93 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
HPS4-202ENST00000398145 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 FBXL7Q9UJT9 491 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 A0A1W2PS18 150 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 METTL26Q96S19 204 aa9.13□□□□□ -0.95
HPS4-202ENST00000398145 DOPEY2Q9Y3R5 2298 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 HBDP02042 147 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 Q6ZWC4 215 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 CACNG7P62955 275 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 FOXC2Q99958 501 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 RPUSD1Q9UJJ7 312 aaKnown RBP9.12□□□□□ -0.95
HPS4-202ENST00000398145 COX11Q9Y6N1 276 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 C9orf106Q8NAJ2 232 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 USF3Q68DE3 2245 aa9.12□□□□□ -0.95
HPS4-202ENST00000398145 HAPLN4Q86UW8 402 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 OR5A1Q8NGJ0 315 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 hDV102S1A0JD36 115 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.11□□□□□ -0.95
HPS4-202ENST00000398145 IGLC2P0DOY2 106 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 IGLC3P0DOY3 106 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 LOXL4Q96JB6 756 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 COL4A6Q14031 1691 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 H7C2G1 150 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
HPS4-202ENST00000398145 HSD52Q0P140 79 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
HPS4-202ENST00000398145 NHP2Q9NX24 153 aaKnown RBP9.11□□□□□ -0.95
HPS4-202ENST00000398145 PSG8Q9UQ74 426 aa9.11□□□□□ -0.95
HPS4-202ENST00000398145 COX6CP09669 75 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 FAM106CPP0CH98 169 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 FAM27E3Q08E93 113 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 MRPL16Q9NX20 251 aaKnown RBP9.1□□□□□ -0.95
HPS4-202ENST00000398145 CDX4O14627 284 aaPredicted RBP9.1□□□□□ -0.95
HPS4-202ENST00000398145 SELLP14151 372 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 GAGE1Q13065 139 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 C10orf55Q5SWW7 151 aa9.1□□□□□ -0.95
HPS4-202ENST00000398145 CD177Q8N6Q3 437 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms