RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RPLP1P05386 114 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 CAMLGP49069 296 aa18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 SRSF2Q01130 221 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 ZNF343Q6P1L6 599 aa18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 HSD17B11Q8NBQ5 300 aa18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 PHYHIPLQ96FC7 376 aa18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 PSMG3Q9BT73 122 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 MRPL36Q9P0J6 103 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-202ENST00000397396 TCRBV4S1A1TA0A5B7 111 aa18.28■□□□□ 0.52
TSPAN4-202ENST00000397396 IGLC1P0CG04 106 aa18.28■□□□□ 0.52
TSPAN4-202ENST00000397396 CCDC140Q96MF4 163 aa18.28■□□□□ 0.52
TSPAN4-202ENST00000397396 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-202ENST00000397396 AGPAT2O15120 278 aa18.27■□□□□ 0.52
TSPAN4-202ENST00000397396 MGST2Q99735 147 aa18.27■□□□□ 0.52
TSPAN4-202ENST00000397396 IGKV1OR2-108A0A075B7D4 117 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 OR2T8A6NH00 312 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 F8W735 103 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 HAX1O00165 279 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 CFDP00746 253 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 IGHV3-23P01764 117 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 LGALS1P09382 135 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 SEC11BP0C7V7 166 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 ATP6V0CP27449 155 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 GPR183P32249 361 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 CDX1P47902 265 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 RPL29P47914 159 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 YPEL3P61236 119 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 CLEC19AQ6UXS0 136 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 LCNL1Q6ZST4 164 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 CYP2G1PQ6ZSU1 146 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 GGTLC1Q9BX51 225 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 S4R3C0 116 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 C2CD3Q4AC94 2353 aa18.26■□□□□ 0.51
TSPAN4-202ENST00000397396 TGOLN2O43493 480 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 IGHV3-11P01762 117 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 CLEC3BP05452 202 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 SERF2P84101 59 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 RELQ04864 619 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 KIAA0141Q14154 515 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 KHDC1LQ5JSQ8 128 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 RSG1Q9BU20 258 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 CUBNO60494 3623 aa18.25■□□□□ 0.51
TSPAN4-202ENST00000397396 IGKV1D-37A0A075B6S9 117 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 SPP1P10451 314 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 RUNX1Q01196 453 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 BPIFCQ8NFQ6 507 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 OR2G3Q8NGZ4 309 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 C4orf3Q8WVX3 66 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 PEF1Q9UBV8 284 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 SLC45A2Q9UMX9 530 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 TSSC4Q9Y5U2 329 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 SETD2Q9BYW2 2564 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 NF1P21359 2839 aa18.24■□□□□ 0.51
TSPAN4-202ENST00000397396 TSPAN15O95858 294 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 TOMM40O96008 361 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 CTSGP08311 255 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 ARL3P36405 182 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 ZNF616Q08AN1 781 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 SLC25A32Q9H2D1 315 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 IGKV1-17P01599 117 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 MBP02144 154 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 B2MP61769 119 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 TIGITQ495A1 244 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 TCTEX1D4Q5JR98 221 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 PXDC1Q5TGL8 231 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 Q6ZRG5 221 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 Q8WTZ3 238 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 GNB4Q9HAV0 340 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 PXMP4Q9Y6I8 212 aa18.23■□□□□ 0.51
TSPAN4-202ENST00000397396 GGCTO75223 188 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 IFNA7P01567 189 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 RD3LP0DJH9 198 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 PRR20EP86478 221 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 PRR20CP86479 221 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 PRR20DP86480 221 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 PRR20BP86481 221 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 PRR20AP86496 221 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 ZNF600Q6ZNG1 722 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 STPG3Q8N7X2 389 aa18.22■□□□□ 0.51
TSPAN4-202ENST00000397396 UMAD1C9J7I0 102 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 CD28P10747 220 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 ZNF90Q03938 601 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 S100A7AQ86SG5 101 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 PRIMA1Q86XR5 153 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 OR51G1Q8NGK1 321 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 SH3BGRL3Q9H299 93 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 SLC39A9Q9NUM3 307 aa18.21■□□□□ 0.51
TSPAN4-202ENST00000397396 NUDT19A8MXV4 375 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 RAB5CP51148 216 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 ACOT6Q3I5F7 207 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 AWAT1Q58HT5 328 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 FFAR4Q5NUL3 377 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 AKR1C8PQ5T2L2 129 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 MIC13Q5XKP0 118 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 TEX261Q6UWH6 196 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 TMED6Q8WW62 240 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 CHRDL1Q9BU40 450 aa18.2■□□□□ 0.5
TSPAN4-202ENST00000397396 JMJD1CQ15652 2540 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 ANKRD34BA5PLL1 514 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms