RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 HBG1P69891 147 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 HBG2P69892 147 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 C15orf32Q32M92 178 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 UQCC3Q6UW78 93 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 GNPNAT1Q96EK6 184 aaPredicted RBP11.15□□□□□ -0.62
SEC13-208ENST00000397109 MAGT1Q9H0U3 335 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
SEC13-208ENST00000397109 IGSF23A1L1A6 192 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 CYB5BO43169 146 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 TMEM50AO95807 157 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 TRBV12-3P01733 135 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 MYOD1P15172 320 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 RPP30P78346 268 aaKnown RBP11.14□□□□□ -0.63
SEC13-208ENST00000397109 ATP6V1FQ16864 119 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 OR1S2Q8NGQ3 325 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 B9D2Q9BPU9 175 aa11.14□□□□□ -0.63
SEC13-208ENST00000397109 PARD6GQ9BYG4 376 aaPredicted RBP11.14□□□□□ -0.63
SEC13-208ENST00000397109 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
SEC13-208ENST00000397109 IGLC7A0M8Q6 106 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 UMAD1C9J7I0 102 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 CD69Q07108 199 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 THYN1Q9P016 225 aa11.13□□□□□ -0.63
SEC13-208ENST00000397109 STRAPQ9Y3F4 350 aaKnown RBP11.13□□□□□ -0.63
SEC13-208ENST00000397109 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 BMPR1BO00238 502 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 REG1AP05451 166 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 SPCS3P61009 180 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 FAM74A1Q5RGS3 127 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 IL34Q6ZMJ4 242 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 MARC2Q969Z3 335 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 EEF1AKMT3Q96AZ1 226 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 ATP5SQ99766 215 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 OR51B2Q9Y5P1 312 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
SEC13-208ENST00000397109 NDUFB8O95169 186 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 IFNA5P01569 189 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 IGLV1-51P01701 117 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
SEC13-208ENST00000397109 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 SMIM3Q9BZL3 60 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 RBKSQ9H477 322 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
SEC13-208ENST00000397109 TRBV7-1A0A0A6YYK4 115 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 ZNF705EA8MWA4 302 aaPredicted RBP11.11□□□□□ -0.63
SEC13-208ENST00000397109 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 GP9P14770 177 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
SEC13-208ENST00000397109 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 PCNPQ8WW12 178 aaKnown RBP11.11□□□□□ -0.63
SEC13-208ENST00000397109 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SEC13-208ENST00000397109 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
SEC13-208ENST00000397109 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
SEC13-208ENST00000397109 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
SEC13-208ENST00000397109 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
SEC13-208ENST00000397109 BSCL2Q96G97 398 aaPredicted RBP11.1□□□□□ -0.63
SEC13-208ENST00000397109 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
SEC13-208ENST00000397109 CST7O76096 145 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 CSN3P07498 182 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
SEC13-208ENST00000397109 ARL3P36405 182 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 SERF2P84101 59 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 CCDC140Q96MF4 163 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
SEC13-208ENST00000397109 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
SEC13-208ENST00000397109 CEBPZOSA8MTT3 80 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 LGALS9O00182 355 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 IAPPP10997 89 aa11.08□□□□□ -0.64
SEC13-208ENST00000397109 CLINT1Q14677 625 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms