RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 THYN1Q9P016 225 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 CACNA1AO00555 2505 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 NAV3Q8IVL0 2385 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
SNX6-202ENST00000396526 IGKV1D-37A0A075B6S9 117 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 TMEM11P17152 192 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 LDLRAD2Q5SZI1 272 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 UBE2CO00762 179 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 NDUFA6P56556 154 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 SIRPDQ9H106 197 aa12.87□□□□□ -0.35
SNX6-202ENST00000396526 AURKAIP1Q9NWT8 199 aaPredicted RBP12.87□□□□□ -0.35
SNX6-202ENST00000396526 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 PSMB11A5LHX3 300 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 OVOL3O00110 214 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 HOXB4P17483 251 aaPredicted RBP12.86□□□□□ -0.35
SNX6-202ENST00000396526 SSBP2P81877 361 aaPredicted RBP12.86□□□□□ -0.35
SNX6-202ENST00000396526 OCC1Q8TAD7 63 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 MFAP2P55001 183 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
SNX6-202ENST00000396526 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 PIMREGQ9BSJ6 248 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 MRPL36Q9P0J6 103 aaKnown RBP12.86□□□□□ -0.35
SNX6-202ENST00000396526 CD24P25063 80 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
SNX6-202ENST00000396526 LINC00518Q8N0U6 118 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 CCL19Q99731 98 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
SNX6-202ENST00000396526 AKAP6Q13023 2319 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 TRAV5A0A0B4J249 113 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 ARPC1AQ92747 370 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 HIGD1AQ9Y241 93 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 LMO4P61968 165 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
SNX6-202ENST00000396526 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 FAM168AQ92567 244 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 ABCA1O95477 2261 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
SNX6-202ENST00000396526 RD3LP0DJH9 198 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 PLP1P60201 277 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 FOXL1Q12952 345 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 RBM14Q96PK6 669 aaKnown RBP12.84□□□□□ -0.35
SNX6-202ENST00000396526 HNF1AP20823 631 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 LYZP61626 148 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 EBI3Q14213 229 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 TEX38Q6PEX7 206 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
SNX6-202ENST00000396526 CACNA1BQ00975 2339 aa12.83□□□□□ -0.35
SNX6-202ENST00000396526 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 I3L2K1 104 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 TAS2R60P59551 318 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 CX3CL1P78423 397 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 NDUFS8O00217 210 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 S100A2P29034 98 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 CENPWQ5EE01 88 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 RNF24Q9Y225 148 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 ACACBO00763 2458 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
SNX6-202ENST00000396526 TRBV20OR9-2A0A075B6H5 130 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 GGTLC3B5MD39 225 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 IGLC1P0CG04 106 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 PYYP10082 97 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 MFAP4P55083 255 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 FAM103A1Q9BTL3 118 aaKnown RBP12.82□□□□□ -0.36
SNX6-202ENST00000396526 ELOVL1Q9BW60 279 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 GNG7O60262 68 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 PSG1P11464 419 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BCP62807 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST2H2BEQ16778 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BHQ93079 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BNQ99877 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 HIST1H2BMQ99879 126 aa12.82□□□□□ -0.36
SNX6-202ENST00000396526 TRAV9-1A0A075B6T8 112 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 HOXA5P20719 270 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 TBX15Q96SF7 602 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 C12orf57Q99622 126 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 ATP5J2P56134 94 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
SNX6-202ENST00000396526 FRZBQ92765 325 aa12.81□□□□□ -0.36
SNX6-202ENST00000396526 TYMSP04818 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms