RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SLIRPQ9GZT3 109 aaKnown RBP12.6□□□□□ -0.39
EXOSC3-202ENST00000396521 U3KQE9 123 aa12.6□□□□□ -0.39
EXOSC3-202ENST00000396521 A0A0B4J293 547 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 RTL8CO15255 209 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 IFNA10P01566 189 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 RCVRNP35243 200 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 SNX29P2Q8IUI4 249 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 Q8WTZ3 238 aa12.59□□□□□ -0.39
EXOSC3-202ENST00000396521 B3GALNT1O75752 331 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 P0C879 139 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 SPART-AS1P0CW21 52 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 S100A5P33763 92 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 RRNAD1Q96FB5 475 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 CELA1Q9UNI1 258 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.4
EXOSC3-202ENST00000396521 CTDSP2O14595 271 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 IGKV1-5P01602 117 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 SLC25A4P12235 298 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 PPP5CP53041 499 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 YPEL3P61236 119 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 BSXQ3C1V8 233 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 SPINK9Q5DT21 86 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 RNASE12Q5GAN4 147 aaKnown RBP12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 C15orf40Q8WUR7 153 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-202ENST00000396521 CD74P04233 296 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 PGAM2P15259 253 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 ETV6P41212 452 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 HTR2BP41595 481 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 IL18Q14116 193 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 RNF212Q495C1 297 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 NRN1Q9NPD7 142 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 PFDN2Q9UHV9 154 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 DNAH2Q9P225 4427 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 MUC4Q99102 2169 aa12.56□□□□□ -0.4
EXOSC3-202ENST00000396521 FAM90A26D6RGX4 464 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 H3BMM0 161 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 M0R2N4 97 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 NUP62P37198 522 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 PIGPP57054 158 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 SPCS3P61009 180 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 IZUMO4Q1ZYL8 232 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 FAM219AQ8IW50 185 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 UBE2DNLQ8IWF7 75 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 ARRDC1Q8N5I2 433 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 RNASEH2CQ8TDP1 164 aaKnown RBP12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 BATF3Q9NR55 127 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 RABL2AQ9UBK7 228 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 RABL2BQ9UNT1 228 aa12.55□□□□□ -0.4
EXOSC3-202ENST00000396521 AGRNO00468 2067 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 C3orf85A0A1B0GTC6 90 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 TBPP20226 339 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 NKX2-1P43699 371 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 TIGITQ495A1 244 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 AARDQ4LEZ3 155 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 ETFRF1Q6IPR1 90 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 Q6ZR54 194 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 NOXA1Q86UR1 476 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 ZFAND1Q8TCF1 268 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 MRPL36Q9P0J6 103 aaKnown RBP12.54□□□□□ -0.4
EXOSC3-202ENST00000396521 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 OR10J1P30954 320 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 MLANAQ16655 118 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 TRIM16LQ309B1 348 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 ZNF767PQ75MW2 155 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 RNASE11Q8TAA1 199 aaKnown RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 RFNGQ9Y644 331 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
EXOSC3-202ENST00000396521 DNAH17Q9UFH2 4485 aa12.52□□□□□ -0.4
EXOSC3-202ENST00000396521 BUB3O43684 328 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 DHODHQ02127 395 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 OXA1LQ15070 435 aa12.52□□□□□ -0.41
EXOSC3-202ENST00000396521 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms