RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RELBQ01201 579 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 RPP25LQ8N5L8 163 aaKnown RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 AP1S3Q96PC3 154 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 GAFA1Q96PS6 74 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 NAGKQ9UJ70 344 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV1-3A0A0C4DH29 117 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 GATCO43716 136 aaKnown RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TGFAP01135 160 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 CMC4P56277 68 aaPredicted RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FABP9Q0Z7S8 132 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 WDFY1Q8IWB7 410 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ASH1LQ9NR48 2969 aaKnown RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 IL4P05112 153 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 CRISP2P16562 243 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FOXL1Q12952 345 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 C1orf194Q5T5A4 169 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 OR4B1Q8NGF8 309 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 PRSS22Q9GZN4 317 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LBHQ53QV2 105 aaPredicted RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 APCP25054 2843 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LY6DQ14210 128 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 SEM1Q6ZVN7 128 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 PCNPQ8WW12 178 aaKnown RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 H3BUA1 57 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 NDUFB4O95168 129 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 GCGP01275 180 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 DMRTA1Q5VZB9 504 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LINC00305Q7Z4B0 112 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 VKORC1L1Q8N0U8 176 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 OR5T1Q8NG75 326 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 IGKV1-6A0A0C4DH72 117 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FAM223BA6NKX1 122 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 WISP1O95388 367 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 PPBPP02775 128 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TPPP2P59282 170 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ELOBQ15370 118 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FAM223AQ8IWN6 122 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 Q8NA96 180 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 IGFBPL1Q8WX77 278 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 OR9G9P0C7N8 305 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 KHDC1LQ5JSQ8 128 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ATP5L2Q7Z4Y8 100 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 WDR86Q86TI4 376 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 RNF125Q96EQ8 232 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 NDUFA4L2Q9NRX3 87 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 F11RQ9Y624 299 aaKnown RBP2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LILRA1O75019 489 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 SMUG1Q53HV7 270 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 PAPPA-AS1Q5QFB9 102 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM70Q9BUB7 260 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 IGKV1-16P04430 117 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 MSMBP08118 114 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 CCL3L1P16619 93 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 DEFA6Q01524 100 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 FBXL15Q9H469 300 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LINC00473A8K010 186 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 CA2P00918 260 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM183BQ1AE95 376 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 LYPD6BQ8NI32 183 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 VN1R17PQ8TDU5 208 aa2.77□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF503-AS2A6NEH8 195 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 DNASE2O00115 360 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TCAPO15273 167 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ATP5G2Q06055 141 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 CT83Q5H943 113 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 C1QL4Q86Z23 238 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 GGTLC1Q9BX51 225 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 PRR27Q6MZM9 219 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 OR10J6PQ8NGY7 276 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 SIAH2O43255 324 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 WT1P19544 449 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ECSCRQ19T08 205 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 LEMD1Q68G75 181 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 LINC01356Q8N9X3 169 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF383Q8NA42 475 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 SFRP2Q96HF1 295 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MRPL20Q9BYC9 149 aaKnown RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 OR2T8A6NH00 312 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TRGC1P0CF51 173 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 C11orf53Q8IXP5 236 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ASCL2Q99929 193 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 OR5AL1P0C617 328 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 HCP5Q6MZN7 132 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 EBLN2Q6P2I7 272 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TEX38Q6PEX7 206 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 SHISA9B4DS77 424 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 TIMM23O14925 209 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MFAP2P55001 183 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MIC13Q5XKP0 118 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF114Q8NC26 417 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 EAF1Q96JC9 268 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 NOL4LQ96MY1 436 aaPredicted RBP2.76□□□□□ -1.97
VPS13C-203ENST00000395896 LINC00052Q96N35 136 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 PEMTQ9UBM1 199 aa2.76□□□□□ -1.97
VPS13C-203ENST00000395896 MXRA5Q9NR99 2828 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms