RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
CXCL12-204ENST00000395793 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
CXCL12-204ENST00000395793 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
CXCL12-204ENST00000395793 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
CXCL12-204ENST00000395793 A0A1W2PS18 150 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 CEBPZOSA8MTT3 80 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 DEFB4AO15263 64 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 SUPT4H1P63272 117 aaKnown RBP13.15□□□□□ -0.3
CXCL12-204ENST00000395793 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
CXCL12-204ENST00000395793 OR1S2Q8NGQ3 325 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 PRRT1Q99946 306 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 SOSTQ9BQB4 213 aa13.15□□□□□ -0.3
CXCL12-204ENST00000395793 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
CXCL12-204ENST00000395793 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-204ENST00000395793 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 KNCNA6PVL3 124 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 ZNF688P0C7X2 276 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 TMBIM6P55061 237 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 USF2Q15853 346 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-204ENST00000395793 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 RNASEH2CQ8TDP1 164 aaKnown RBP13.14□□□□□ -0.31
CXCL12-204ENST00000395793 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 GRAMD2BQ96HH9 432 aa13.14□□□□□ -0.31
CXCL12-204ENST00000395793 H3BMQ9 156 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 C4BPBP20851 252 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 NPY1RP25929 384 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 OR10J1P30954 320 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 STHQ8IWL8 128 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 BCL7BQ9BQE9 202 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 RABL2AQ9UBK7 228 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-204ENST00000395793 RABL2BQ9UNT1 228 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 KMT2AQ03164 3969 aa13.13□□□□□ -0.31
CXCL12-204ENST00000395793 SLC25A4P12235 298 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 TNFSF8P32971 234 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 YPEL3P61236 119 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-204ENST00000395793 C16orf54Q6UWD8 224 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
CXCL12-204ENST00000395793 Q8NAQ8 132 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 FBXL17Q9UF56 701 aa13.12□□□□□ -0.31
CXCL12-204ENST00000395793 SCGB2A1O75556 95 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 HNRNPCP07910 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
CXCL12-204ENST00000395793 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 Q8WTZ3 238 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 ACY3Q96HD9 319 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
CXCL12-204ENST00000395793 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
CXCL12-204ENST00000395793 DEDDO75618 318 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 IL4P05112 153 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 AKR1C4P17516 323 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 DHRS2Q13268 280 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
CXCL12-204ENST00000395793 RBKSQ9H477 322 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 MCUBQ9NWR8 336 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 KCNIP3Q9Y2W7 256 aa13.1□□□□□ -0.31
CXCL12-204ENST00000395793 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 TOMM40O96008 361 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
CXCL12-204ENST00000395793 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 CCR6P51684 374 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
CXCL12-204ENST00000395793 SMCO1Q147U7 214 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
CXCL12-204ENST00000395793 ACTL10Q5JWF8 245 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 DTD1Q8TEA8 209 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 X6R8D5 127 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 FRAS1Q86XX4 4008 aa13.09□□□□□ -0.31
CXCL12-204ENST00000395793 IGHV4-28A0A0C4DH34 117 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 HELTA6NFD8 242 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 FABP12A6NFH5 140 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 IFNA10P01566 189 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 PSG1P11464 419 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 ETFRF1Q6IPR1 90 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 MCFD2Q8NI22 146 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 MFFQ9GZY8 342 aa13.08□□□□□ -0.32
CXCL12-204ENST00000395793 ZNF705EA8MWA4 302 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-204ENST00000395793 FAM90A26D6RGX4 464 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 BUB3O43684 328 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 SPP1P10451 314 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 LGALS9CQ6DKI2 356 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-204ENST00000395793 LGI3Q8N145 548 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 SCGB3A2Q96PL1 93 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 RAB40CQ96S21 281 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 CLEC5AQ9NY25 188 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 V9GYH0 126 aa13.07□□□□□ -0.32
CXCL12-204ENST00000395793 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
CXCL12-204ENST00000395793 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
CXCL12-204ENST00000395793 NOXA1Q86UR1 476 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms