RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 TBR1Q16650 682 aa9.42□□□□□ -0.9
RAPGEF3-202ENST00000395358 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF3-202ENST00000395358 JPT1Q9UK76 154 aa9.42□□□□□ -0.9
RAPGEF3-202ENST00000395358 ZNF716A6NP11 495 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 OPRK1P41145 380 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 PTGDSP41222 190 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 MEIG1Q5JSS6 88 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 C10orf126Q8N4M7 172 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 RRHO14718 337 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 SLC25A5P05141 298 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 ALKBH6Q3KRA9 238 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 Q8N976 141 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 ERG28Q9UKR5 140 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 ZIC3O60481 467 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 Q1RN00 199 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 WFDC3Q8IUB2 231 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 KIR3DL3Q8N743 410 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 A0A1W2PNU3 283 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 FAM90A27PA6NNH2 459 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 Q0VFX4 171 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 MED12LQ86YW9 2145 aa9.41□□□□□ -0.9
RAPGEF3-202ENST00000395358 SZT2Q5T011 3432 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 LIPT2A6NK58 231 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 CLDN14O95500 239 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 MT-ATP8P03928 68 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 ZNF391Q9UJN7 358 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 TM4SF5O14894 197 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 GATA3P23771 443 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 COL8A1P27658 744 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 GPR82Q96P67 336 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 C12orf49Q9H741 205 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
RAPGEF3-202ENST00000395358 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 MPDU1O75352 247 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 PLA2G5P39877 138 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 RNPS1Q15287 305 aaKnown RBP9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 C1orf147Q96MC9 270 aaPredicted RBP9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 CACNA1BQ00975 2339 aa9.4□□□□□ -0.91
RAPGEF3-202ENST00000395358 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 PCBD1P61457 104 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 Q6ZRM9 215 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 V9GYV3 84 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 SPTAN1Q13813 2472 aaKnown RBP9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 OR1L1Q8NH94 360 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 SPRY4Q9C004 299 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 TRGV8A0A0C4DH27 118 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 A0A1W2PRD5 423 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 A0A1W2PRF3 423 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 A0A1W2PRM7 423 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 hADV38S2A0JD32 116 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 C9JCJ5 164 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 M0QXV9 152 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 IGHV3-9P01782 118 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 ATP23Q9Y6H3 246 aa9.39□□□□□ -0.91
RAPGEF3-202ENST00000395358 NCOR2Q9Y618 2525 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 IFITM1P13164 125 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 EVI2AP22794 236 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 INO80CQ6PI98 192 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 OR13C6PQ8NH95 151 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 H1FXQ92522 213 aaKnown RBP9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 A0A0J9YW62 118 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 IGHV3-64DA0A0J9YX35 117 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 MFAP4P55083 255 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
RAPGEF3-202ENST00000395358 CD24P25063 80 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 FNDC7Q5VTL7 733 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 OSR1Q8TAX0 266 aaPredicted RBP9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 PLPPR2Q96GM1 343 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 RAB1BQ9H0U4 201 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 FZR1Q9UM11 496 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 ROS1P08922 2347 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 CRYGCP07315 174 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 RFPL3SP0C7P2 107 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
RAPGEF3-202ENST00000395358 RAB1CQ92928 201 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms