RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 COX6B1P14854 86 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 FXYD3Q14802 87 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 MMDQ15546 238 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 SSMEM1Q8WWF3 244 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 H3BRN7 92 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 ZNF253O75346 499 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
CDC42SE2-202ENST00000395246 FLI1Q01543 452 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 M0QZK8 103 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 PAGE4O60829 102 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 PRB1P04280 392 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 TMEM11P17152 192 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 FABP1P07148 127 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CDC42SE2-202ENST00000395246 NDUFB8O95169 186 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 ZNF90Q03938 601 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 ZNF502Q8TBZ5 544 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 IGHG2P01859 326 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 TAS2R60P59551 318 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 FAM120AOSQ5T036 256 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 PERPQ96FX8 193 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 GGCTO75223 188 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 IGLC2P0DOY2 106 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 ATP5J2P56134 94 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 FOXL1Q12952 345 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
CDC42SE2-202ENST00000395246 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 HILPDAQ9Y5L2 63 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 U3KQE9 123 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 A0A087X0K7 114 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 PPIFP30405 207 aaKnown RBP11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 ZNF491Q8N8L2 437 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 OPN1MWP04001 364 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 OPN1MW2P0DN77 364 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 OPN1MW3P0DN78 364 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 ATP5G3P48201 142 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 C22orf15Q8WYQ4 148 aa11.1□□□□□ -0.63
CDC42SE2-202ENST00000395246 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 PLA2G2AP14555 144 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 PDE6HQ13956 83 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 Q8N2B8 174 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 CDC42EP3Q9UKI2 254 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 GCGP01275 180 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 LGALS4P56470 323 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
CDC42SE2-202ENST00000395246 NCOR2Q9Y618 2525 aa11.08□□□□□ -0.63
CDC42SE2-202ENST00000395246 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 OR51G1Q8NGK1 321 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 MYOZ3Q8TDC0 251 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 ACTL6BO94805 426 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 AKAP9Q99996 3911 aa11.08□□□□□ -0.64
CDC42SE2-202ENST00000395246 DEFA4P12838 97 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 RAB5AP20339 215 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 THYN1Q9P016 225 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ZFHX3Q15911 3703 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ABCA4P78363 2273 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 CLDN34H7C241 214 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 HYPMO75409 117 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 CTSGP08311 255 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 PSG1P11464 419 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
CDC42SE2-202ENST00000395246 ZNF785A8K8V0 405 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms