RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 C21orf140B9A014 251 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 NKX2-8O15522 239 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
CLIP2-203ENST00000395060 SAA1P0DJI8 122 aaPredicted RBP11.63□□□□□ -0.55
CLIP2-203ENST00000395060 FOXE3Q13461 319 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 ZCCHC24Q8N2G6 241 aaKnown RBP11.63□□□□□ -0.55
CLIP2-203ENST00000395060 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 M0R1B8 84 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
CLIP2-203ENST00000395060 C9orf106Q8NAJ2 232 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 DDB2Q92466 427 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 LY96Q9Y6Y9 160 aa11.63□□□□□ -0.55
CLIP2-203ENST00000395060 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 COTL1Q14019 142 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 C17orf58Q2M2W7 97 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 INO80CQ6PI98 192 aaPredicted RBP11.62□□□□□ -0.55
CLIP2-203ENST00000395060 OR8B3Q8NGG8 313 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 SAP30LQ9HAJ7 183 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 MRPL36Q9P0J6 103 aaKnown RBP11.62□□□□□ -0.55
CLIP2-203ENST00000395060 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
CLIP2-203ENST00000395060 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 PEX7O00628 323 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 HCP5Q6MZN7 132 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 Q6ZT83 130 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 RBMXL3Q8N7X1 1067 aaKnown RBP11.62□□□□□ -0.55
CLIP2-203ENST00000395060 OR1B1Q8NGR6 318 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 TMEM70Q9BUB7 260 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
CLIP2-203ENST00000395060 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 SPAARA0A1B0GVQ0 90 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 UQCRFS1P47985 274 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 PLA2G2CQ5R387 149 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 RUSC1-AS1Q66K80 236 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 CORO2AQ92828 525 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 COMMD5Q9GZQ3 224 aa11.62□□□□□ -0.55
CLIP2-203ENST00000395060 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 PGPA6NDG6 321 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 ZNF891A8MT65 544 aaPredicted RBP11.61□□□□□ -0.55
CLIP2-203ENST00000395060 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 PPP1R35Q8TAP8 253 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 FAM167A-AS1Q96KT0 104 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 CHODLQ9H9P2 273 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 SLC25A10Q9UBX3 287 aaPredicted RBP11.61□□□□□ -0.55
CLIP2-203ENST00000395060 ZZEF1O43149 2961 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 A0A1W2PRD5 423 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 A0A1W2PRF3 423 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 A0A1W2PRM7 423 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 C10orf113Q5VZT2 155 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 DEFB124Q8NES8 71 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 HARBI1Q96MB7 349 aa11.61□□□□□ -0.55
CLIP2-203ENST00000395060 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 DLX1P56177 255 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 FXYD7P58549 80 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 ZNF835Q9Y2P0 537 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 AARDQ4LEZ3 155 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 TMEM116Q8NCL8 245 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 MDS2Q8NDY4 140 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 FNDC4Q9H6D8 234 aaPredicted RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 MRPS16Q9Y3D3 137 aaKnown RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 A0A1W2PRE2 83 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 H0YJW9 148 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 PRCDQ00LT1 54 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 ZNF329Q86UD4 541 aa11.6□□□□□ -0.55
CLIP2-203ENST00000395060 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
CLIP2-203ENST00000395060 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 UPK2O00526 184 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 KLK10O43240 276 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 APOA2P02652 100 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 PATE2Q6UY27 113 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 MUC15Q8N387 334 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 IGHV1-24A0A0C4DH33 117 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 CCL3L1P16619 93 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 CD69Q07108 199 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 TMEM177Q53S58 311 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
CLIP2-203ENST00000395060 KBTBD11-OT1A0A1B0GTJ5 212 aa11.58□□□□□ -0.56
CLIP2-203ENST00000395060 TEX45Q8NA69 505 aa11.58□□□□□ -0.56
CLIP2-203ENST00000395060 MBD6Q96DN6 1003 aa11.58□□□□□ -0.56
CLIP2-203ENST00000395060 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
CLIP2-203ENST00000395060 RTL8BQ17RB0 113 aa11.58□□□□□ -0.56
CLIP2-203ENST00000395060 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms