RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 LYPD3O95274 346 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 C10orf126Q8N4M7 172 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 GTF3AQ92664 365 aaKnown RBP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 DOCK4Q8N1I0 1966 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 LOC105371267A0A1B0GV96 52 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 CHCHD5Q9BSY4 110 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 GSN-AS1Q9NRJ2 163 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 SRSF7Q16629 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 LHFPL4Q7Z7J7 247 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 SLC25A15Q9Y619 301 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 H3BUX3 64 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 PAQR4Q8N4S7 273 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 IGHV1-3A0A0C4DH29 117 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 LILRA1O75019 489 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 SELLP14151 372 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 RPL35AP18077 110 aaKnown RBP8.59□□□□□ -1.03
COL4A6-203ENST00000394872 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
COL4A6-203ENST00000394872 A0A087WV48 116 aa8.59□□□□□ -1.04
COL4A6-203ENST00000394872 CRYGSP22914 178 aa8.59□□□□□ -1.04
COL4A6-203ENST00000394872 MINOS1Q5TGZ0 78 aa8.59□□□□□ -1.04
COL4A6-203ENST00000394872 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.04
COL4A6-203ENST00000394872 MINOS1-NBL1R4GNA1 71 aa8.59□□□□□ -1.04
COL4A6-203ENST00000394872 CCL20P78556 96 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 A0A0A6YYD4 124 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 CD28P10747 220 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 EVI2AP22794 236 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 RPL23P62829 140 aaKnown RBP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 KIR3DL3Q8N743 410 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 FAM169BQ8N8A8 192 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 SRRM5B3KS81 715 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 NDUFS8O00217 210 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
COL4A6-203ENST00000394872 SEPSECSQ9HD40 501 aaKnown RBP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
COL4A6-203ENST00000394872 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 EFNA2O43921 213 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 RPL15P61313 204 aaKnown RBP8.57□□□□□ -1.04
COL4A6-203ENST00000394872 LINC01356Q8N9X3 169 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 RPUSD1Q9UJJ7 312 aaKnown RBP8.57□□□□□ -1.04
COL4A6-203ENST00000394872 RALGAPA1Q6GYQ0 2036 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 SNRNP200O75643 2136 aaKnown RBP8.57□□□□□ -1.04
COL4A6-203ENST00000394872 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
COL4A6-203ENST00000394872 A0A087WWC5 75 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 MDS2Q8NDY4 140 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 RCHY1Q96PM5 261 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 KLHL30-AS1Q8NEE0 82 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 NABP1Q96AH0 204 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 COQ2Q96H96 371 aa8.57□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-203ENST00000394872 PRR32B1ATL7 298 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-203ENST00000394872 EFNB3Q15768 340 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 HEPN1Q6WQI6 88 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 ADMP35318 185 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 FXYD7P58549 80 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 C10orf55Q5SWW7 151 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 ASCL4Q6XD76 172 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 RNF182Q8N6D2 247 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 CRIM1Q9NZV1 1036 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 M0R1W7 72 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 GHRHP01286 108 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 C1QTNF9P0C862 333 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 SP5Q6BEB4 398 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-203ENST00000394872 FAM89BQ8N5H3 189 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 SSC4DQ8WTU2 575 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 RNF126Q9BV68 326 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 FBLN5Q9UBX5 448 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 IGHV3-73A0A0B4J1V6 119 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 TRAV5A0A0B4J249 113 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 SLC25A16P16260 332 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 ZNF362Q5T0B9 420 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV1-12A0A0C4DH73 117 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 A0A1W2PRE2 83 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 PIP4P2Q8N4L2 257 aa8.56□□□□□ -1.04
COL4A6-203ENST00000394872 TRBV7-1A0A0A6YYK4 115 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
COL4A6-203ENST00000394872 TRAV12-3A0A0B4J271 114 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 OOSP1A8MZH6 123 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 MSRB2Q9Y3D2 182 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 TYMSP04818 313 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 ACTL10Q5JWF8 245 aa8.55□□□□□ -1.04
COL4A6-203ENST00000394872 C17orf82Q86X59 251 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-203ENST00000394872 NIT1Q86X76 327 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 835.7 ms