RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 IGHV3-48P01763 117 aa12.65□□□□□ -0.38
PTBP1-204ENST00000394601 EAF1Q96JC9 268 aaPredicted RBP12.65□□□□□ -0.38
PTBP1-204ENST00000394601 GGTLC1Q9BX51 225 aa12.65□□□□□ -0.38
PTBP1-204ENST00000394601 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
PTBP1-204ENST00000394601 TRAV30A0A087WSZ9 112 aa12.65□□□□□ -0.39
PTBP1-204ENST00000394601 GAGE10A6NGK3 116 aa12.65□□□□□ -0.39
PTBP1-204ENST00000394601 TOX4O94842 621 aa12.65□□□□□ -0.39
PTBP1-204ENST00000394601 OPRK1P41145 380 aa12.65□□□□□ -0.39
PTBP1-204ENST00000394601 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.39
PTBP1-204ENST00000394601 PLXNB1O43157 2135 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 IGLC7A0M8Q6 106 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
PTBP1-204ENST00000394601 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 IGHV1-69-2A0A0G2JMI3 117 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 HSBP1L1C9JCN9 74 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 MYOD1P15172 320 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 OR1N2Q8NGR9 330 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
PTBP1-204ENST00000394601 DCHS2Q6V1P9 2916 aa12.64□□□□□ -0.39
PTBP1-204ENST00000394601 WNK2Q9Y3S1 2297 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 UBE2G1P62253 170 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
PTBP1-204ENST00000394601 SPATA12Q7Z6I5 190 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 SMAGPQ0VAQ4 97 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 S1PR3Q99500 378 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 TMPRSS2O15393 492 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 MPDU1O75352 247 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 STAG3L2P0CL84 134 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 STAG3L3P0CL85 134 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 POU2AF1Q16633 256 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 ZNF788Q6ZQV5 615 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 MIR17HGQ75NE6 70 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.63□□□□□ -0.39
PTBP1-204ENST00000394601 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
PTBP1-204ENST00000394601 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 KIR2DS2P43631 304 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 TEX36Q5VZQ5 186 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 GSX1Q9H4S2 264 aaPredicted RBP12.62□□□□□ -0.39
PTBP1-204ENST00000394601 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 CORTO00230 105 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 TAX1BP3O14907 124 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 TOMM40O96008 361 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 GCHFRP30047 84 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 OR5B3Q8NH48 314 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
PTBP1-204ENST00000394601 CACNA1BQ00975 2339 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
PTBP1-204ENST00000394601 PLAUP00749 431 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 CD40P25942 277 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 TCF15Q12870 199 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 MRPL52Q86TS9 123 aaKnown RBP12.61□□□□□ -0.39
PTBP1-204ENST00000394601 OR4S2Q8NH73 311 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 H3BUT2 72 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 Q0VG73 95 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 V9GYV3 84 aa12.61□□□□□ -0.39
PTBP1-204ENST00000394601 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 CXorf1O96002 111 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 FOXE3Q13461 319 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 CCL13Q99616 98 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 H3BTX0 84 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 SLC25A48Q6ZT89 311 aaKnown RBP12.6□□□□□ -0.39
PTBP1-204ENST00000394601 NUP37Q8NFH4 326 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 OR4F17Q8NGA8 305 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 FAM57AQ8TBR7 257 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
PTBP1-204ENST00000394601 YLPM1P49750 1951 aaKnown RBP12.6□□□□□ -0.39
PTBP1-204ENST00000394601 TNFAIP6P98066 277 aaPredicted RBP12.59□□□□□ -0.39
PTBP1-204ENST00000394601 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PKDREJQ9NTG1 2253 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 FXYD7P58549 80 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 HSPE1P61604 102 aaKnown RBP12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PRR20EP86478 221 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PRR20CP86479 221 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PRR20DP86480 221 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PRR20BP86481 221 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 PRR20AP86496 221 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
PTBP1-204ENST00000394601 C7orf71A4D174 169 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 LINC00869P0C866 280 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 ERVK-16P61578 105 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
PTBP1-204ENST00000394601 IGKV1OR2-108A0A075B7D4 117 aa12.58□□□□□ -0.4
PTBP1-204ENST00000394601 MUC15Q8N387 334 aa12.58□□□□□ -0.4
PTBP1-204ENST00000394601 OR1B1Q8NGR6 318 aa12.58□□□□□ -0.4
PTBP1-204ENST00000394601 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms