RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 BOD1L2Q8IYS8 172 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 NABP2Q9BQ15 211 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 C7orf69Q9H7B7 122 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 RABAC1Q9UI14 185 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 IGHV3-64DA0A0J9YX35 117 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 J3QR89 54 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 CAMPP49913 170 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 PRAMEF5Q5TYX0 476 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 GCM1Q9NP62 436 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 FAM186AA6NE01 2351 aa15.34■□□□□ 0.05
HOXC6-202ENST00000394331 PSPNO60542 156 aa15.33■□□□□ 0.05
HOXC6-202ENST00000394331 CT83Q5H943 113 aa15.33■□□□□ 0.05
HOXC6-202ENST00000394331 MTURNQ8N3F0 131 aa15.33■□□□□ 0.05
HOXC6-202ENST00000394331 ESPL1Q14674 2120 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 MPV17P39210 176 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 UQCRFS1P47985 274 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 CKS1BP61024 79 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 FOXE3Q13461 319 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 FAM216AQ8WUB2 273 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 CXXC4Q9H2H0 198 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 VWC2LB2RUY7 222 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 ABHD12Q8N2K0 398 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 THYN1Q9P016 225 aa15.33■□□□□ 0.04
HOXC6-202ENST00000394331 MED12LQ86YW9 2145 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 IGFBP2P18065 325 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 MC5RP33032 325 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 USF3Q68DE3 2245 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 ACTL6BO94805 426 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
HOXC6-202ENST00000394331 GUSBP1Q15486 140 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 PERPQ96FX8 193 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 MRPL32Q9BYC8 188 aaKnown RBP15.32■□□□□ 0.04
HOXC6-202ENST00000394331 PTPRBP23467 1997 aa15.32■□□□□ 0.04
HOXC6-202ENST00000394331 AGFG2O95081 481 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 IGKV3-15P01624 115 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 ADAMTSL5Q6ZMM2 481 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 CNEP1R1Q8N9A8 125 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 C1orf162Q8NEQ5 155 aaPredicted RBP15.31■□□□□ 0.04
HOXC6-202ENST00000394331 OR2Z1Q8NG97 314 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 ADTRPQ96IZ2 230 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 COL25A1Q9BXS0 654 aaPredicted RBP15.31■□□□□ 0.04
HOXC6-202ENST00000394331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.31■□□□□ 0.04
HOXC6-202ENST00000394331 TIMM23BQ5SRD1 257 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 C11orf53Q8IXP5 236 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 TCF19Q9Y242 345 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 FREM2Q5SZK8 3169 aa15.31■□□□□ 0.04
HOXC6-202ENST00000394331 DMDP11532 3685 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 C22orf46C9J442 243 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 C8orf88P0DMB2 117 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
HOXC6-202ENST00000394331 SIGLEC8Q9NYZ4 499 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 MEF2CQ06413 473 aaPredicted RBP15.3■□□□□ 0.04
HOXC6-202ENST00000394331 AESQ08117 197 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 ACP7Q6ZNF0 438 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 Q6ZR03 302 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 ZNF826PQ6ZT77 177 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 DIDO1Q9BTC0 2240 aaKnown RBP15.3■□□□□ 0.04
HOXC6-202ENST00000394331 A1L4Q6 167 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 WNT9BO14905 357 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 ERVK-16P61578 105 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 CCDC144NLQ6NUI1 221 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 FAM222BQ8WU58 562 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 MRAP2Q96G30 205 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 GFRA4Q9GZZ7 299 aa15.3■□□□□ 0.04
HOXC6-202ENST00000394331 AMMECR1Q9Y4X0 333 aaPredicted RBP15.3■□□□□ 0.04
HOXC6-202ENST00000394331 SMAD7O15105 426 aaKnown RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 ZNF207O43670 478 aaKnown RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 CRYBA4P53673 196 aa15.29■□□□□ 0.04
HOXC6-202ENST00000394331 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 TRAT1Q6PIZ9 186 aa15.29■□□□□ 0.04
HOXC6-202ENST00000394331 CXorf67Q86X51 503 aaPredicted RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 ZNF747Q9BV97 191 aa15.29■□□□□ 0.04
HOXC6-202ENST00000394331 TSSC4Q9Y5U2 329 aaPredicted RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 TIMM8AO60220 97 aaPredicted RBP15.29■□□□□ 0.04
HOXC6-202ENST00000394331 CCL11P51671 97 aa15.29■□□□□ 0.04
HOXC6-202ENST00000394331 SLC25A33Q9BSK2 321 aa15.29■□□□□ 0.04
HOXC6-202ENST00000394331 TRAV26-1A0A087WT03 109 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 KIR2DL2P43627 348 aaPredicted RBP15.28■□□□□ 0.04
HOXC6-202ENST00000394331 GPR12P47775 334 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 FABP6P51161 128 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 FOXF2Q12947 444 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 COQ2Q96H96 371 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 PEX7O00628 323 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 SAMD5Q5TGI4 173 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 Q8TCH9 128 aa15.28■□□□□ 0.04
HOXC6-202ENST00000394331 COL8A2P25067 703 aa15.27■□□□□ 0.04
HOXC6-202ENST00000394331 NKX2-8O15522 239 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 ADH4P08319 380 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 FDCSPQ8NFU4 85 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 PRSS22Q9GZN4 317 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 A8MWL6 223 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 NEU4Q8WWR8 484 aaPredicted RBP15.27■□□□□ 0.03
HOXC6-202ENST00000394331 ABHD17AQ96GS6 310 aa15.27■□□□□ 0.03
HOXC6-202ENST00000394331 RPP21Q9H633 154 aaKnown RBP15.27■□□□□ 0.03
HOXC6-202ENST00000394331 NCOR1O75376 2440 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 TRAV17A0A0B4J275 112 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 C15orf61A6NNL5 157 aa15.26■□□□□ 0.03
HOXC6-202ENST00000394331 F8W1H4 67 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms