RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SIGLECL1Q8N7X8 197 aa15.89■□□□□ 0.13
HDDC3-202ENST00000394272 RAB24Q969Q5 203 aa15.89■□□□□ 0.13
HDDC3-202ENST00000394272 LINC00527Q9UJ94 153 aa15.89■□□□□ 0.13
HDDC3-202ENST00000394272 MAP1LC3B2A6NCE7 125 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 EIF3GO75821 320 aaKnown RBP eCLIP15.88■□□□□ 0.13
HDDC3-202ENST00000394272 CDC34P49427 236 aaPredicted RBP15.88■□□□□ 0.13
HDDC3-202ENST00000394272 SCRT1Q9BWW7 348 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 MAP1LC3BQ9GZQ8 125 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 GSX1Q9H4S2 264 aaPredicted RBP15.88■□□□□ 0.13
HDDC3-202ENST00000394272 UQCC3Q6UW78 93 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 FBXL7Q9UJT9 491 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 ZNF580Q9UK33 172 aa15.88■□□□□ 0.13
HDDC3-202ENST00000394272 PSMB11A5LHX3 300 aa15.87■□□□□ 0.13
HDDC3-202ENST00000394272 F8W735 103 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-202ENST00000394272 AP4M1O00189 453 aa15.87■□□□□ 0.13
HDDC3-202ENST00000394272 PPIFP30405 207 aaKnown RBP15.87■□□□□ 0.13
HDDC3-202ENST00000394272 SRSF3P84103 164 aaKnown RBP15.87■□□□□ 0.13
HDDC3-202ENST00000394272 DEFA5Q01523 94 aa15.87■□□□□ 0.13
HDDC3-202ENST00000394272 TMEM160Q9NX00 188 aa15.87■□□□□ 0.13
HDDC3-202ENST00000394272 FGF8P55075 233 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-202ENST00000394272 VN1R17PQ8TDU5 208 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 NOL4LQ96MY1 436 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-202ENST00000394272 C21orf62Q9NYP8 219 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 A0A1W2PPV4 95 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 I3L521 148 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 HMGB3O15347 200 aaKnown RBP15.86■□□□□ 0.13
HDDC3-202ENST00000394272 IGKV1-17P01599 117 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 HNF1AP20823 631 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 FCGR2BP31994 310 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-202ENST00000394272 NPBWR1P48145 328 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 MFAP4P55083 255 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 RHOGP84095 191 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 SEPSECSQ9HD40 501 aaKnown RBP15.86■□□□□ 0.13
HDDC3-202ENST00000394272 ZNF355PQ9NSJ1 428 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 S4R3C0 116 aa15.86■□□□□ 0.13
HDDC3-202ENST00000394272 FLNBO75369 2602 aaKnown RBP15.85■□□□□ 0.13
HDDC3-202ENST00000394272 ANKRD34BA5PLL1 514 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 BRI3O95415 125 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 TMEM86BQ8N661 226 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 NECAP1Q8NC96 275 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 TMEM37Q8WXS4 190 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 SMR3AQ99954 134 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 C19orf24Q9BVV8 132 aa15.85■□□□□ 0.13
HDDC3-202ENST00000394272 CD5P06127 495 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 RHOBP62745 196 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 C15orf32Q32M92 178 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 OR5G3P0C626 314 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 CFHR3Q02985 330 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 GUK1Q16774 197 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 TIGITQ495A1 244 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 TOR2AQ5JU69 321 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 SPATA31B1PQ5VZV4 182 aa15.84■□□□□ 0.13
HDDC3-202ENST00000394272 CUBNO60494 3623 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 TRAV30A0A087WSZ9 112 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 H3BUA1 57 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 STAG3L2P0CL84 134 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 STAG3L3P0CL85 134 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 FAM78BQ5VT40 261 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 GATAD1Q8WUU5 269 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 MS4A10Q96PG2 267 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 TXN2Q99757 166 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 TMEM231Q9H6L2 316 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 MTORP42345 2549 aa15.83■□□□□ 0.12
HDDC3-202ENST00000394272 GNG7O60262 68 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PSG1P11464 419 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PLP1P60201 277 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PMS2P11Q13670 270 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 TMEM95Q3KNT9 176 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 ZNF502Q8TBZ5 544 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PBDC1Q9BVG4 233 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 NPFFR1Q9GZQ6 430 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 FUT9Q9Y231 359 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 HIVEP2P31629 2446 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 LY6G6DO95868 133 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 IGHV3-23P01764 117 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 Q56UQ5 140 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PATE2Q6UY27 113 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 OR1L4Q8NGR5 311 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 DUX5Q96PT3 197 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 PRSS22Q9GZN4 317 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 ZNF702PQ9H963 129 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 DNAJC4Q9NNZ3 241 aa15.82■□□□□ 0.12
HDDC3-202ENST00000394272 IGLV1-40P01703 118 aa15.81■□□□□ 0.12
HDDC3-202ENST00000394272 MIR17HGQ75NE6 70 aa15.81■□□□□ 0.12
HDDC3-202ENST00000394272 PFDN5Q99471 154 aa15.81■□□□□ 0.12
HDDC3-202ENST00000394272 TMPRSS5Q9H3S3 457 aa15.81■□□□□ 0.12
HDDC3-202ENST00000394272 DOK5Q9P104 306 aa15.81■□□□□ 0.12
HDDC3-202ENST00000394272 RBFOX3A6NFN3 312 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 FAM223BA6NKX1 122 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 C9JQL5 133 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 COX7A2P2O60397 106 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 YPEL3P61236 119 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-202ENST00000394272 RBMS3Q6XE24 437 aaKnown RBP15.8■□□□□ 0.12
HDDC3-202ENST00000394272 FAM223AQ8IWN6 122 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 LINC00052Q96N35 136 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 RNF2Q99496 336 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 RARRES2Q99969 163 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 EIF5A2Q9GZV4 153 aaKnown RBP15.8■□□□□ 0.12
HDDC3-202ENST00000394272 GNG13Q9P2W3 67 aa15.8■□□□□ 0.12
HDDC3-202ENST00000394272 TOMM40O96008 361 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms