RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TIGITQ495A1 244 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 GSG1LQ6UXU4 331 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 OR1S2Q8NGQ3 325 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 ZNF414Q96IQ9 312 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 SMIM8Q96KF7 97 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 C2orf50Q96LR7 162 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 GINS3Q9BRX5 216 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 MLXQ9UH92 298 aa14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 LSM4Q9Y4Z0 139 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
PDLIM7-204ENST00000393546 PRKDCP78527 4128 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 TRAV14DV4A0A0A6YYC5 116 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 IGLC1P0CG04 106 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 OR10J1P30954 320 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 BTNL8Q6UX41 500 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 SLC35E1Q96K37 410 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 RAB40CQ96S21 281 aa14.35□□□□□ -0.11
PDLIM7-204ENST00000393546 H3BP45 60 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 IGKV1-17P01599 117 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 MBPP02686 304 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 Q8WTZ3 238 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 SMPXQ9UHP9 88 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 SELENOKQ9Y6D0 94 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
PDLIM7-204ENST00000393546 TRAV25A0A0B4J276 109 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 IGHV7-4-1A0A0J9YVY3 117 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 ZNF785A8K8V0 405 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 TAS2R30P59541 319 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 YPEL3P61236 119 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 GAMTQ14353 236 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 GUCA2BQ16661 112 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 LAMTOR1Q6IAA8 161 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 RBPMS2Q6ZRY4 209 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 GTSCR1Q86UQ5 136 aa14.33□□□□□ -0.12
PDLIM7-204ENST00000393546 BMI1P35226 326 aa14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 PAX9P55771 341 aa14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 TMEM61Q8N0U2 210 aa14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 WDR89Q96FK6 387 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 RHPN1-AS1Q9BWJ2 59 aa14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 ZFAND3Q9H8U3 227 aa14.32□□□□□ -0.12
PDLIM7-204ENST00000393546 L7N2F9 121 aa14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 PTTG1O95997 202 aa14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 NPPCP23582 126 aa14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 VAMP2P63027 116 aa14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 Q8N1Y9 231 aa14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 RCL1Q9Y2P8 373 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 LSM5Q9Y4Y9 91 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-204ENST00000393546 IGHV3-49A0A0A0MS15 119 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 ZFP92A6NM28 416 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 CHEK1O14757 476 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 TSC22D2O75157 780 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 SCAF4O95104 1147 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 RD3LP0DJH9 198 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 METTL26Q96S19 204 aa14.3□□□□□ -0.12
PDLIM7-204ENST00000393546 C7orf66A4D0T2 115 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 PRSS46E5RG02 174 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 K7EPK0 472 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 GOSR2O14653 212 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 SSNA1O43805 119 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 TOMM40O96008 361 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 FABP1P07148 127 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 PVALBP20472 110 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 OR8G2PQ6IF36 304 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 TMEM14EPQ6UXP3 125 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 TMEM231Q9H6L2 316 aa14.29□□□□□ -0.12
PDLIM7-204ENST00000393546 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 A0A1W2PS18 150 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 SIX6O95475 246 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 METTL15P1P0C7V9 234 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 CD81P60033 236 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 IL15RAQ13261 267 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 NARS2Q96I59 477 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 RNF2Q99496 336 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 B9D2Q9BPU9 175 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 NEURL2Q9BR09 285 aa14.28□□□□□ -0.12
PDLIM7-204ENST00000393546 PMS2P5A8MQ11 134 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 TSPAN4O14817 238 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 IL4P05112 153 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 CD5P06127 495 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 PSG1P11464 419 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 CRYBB3P26998 211 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 BCAP31P51572 246 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 S100A10P60903 97 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 CYCSP99999 105 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 RAB32Q13637 225 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 ACOT7LQ6ZUV0 252 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 THAP8Q8NA92 274 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 OR10P1Q8NGE3 313 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 OR51G1Q8NGK1 321 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 TRGV9Q99603 122 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 SPAG8Q99932 426 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 VSIRQ9H7M9 311 aa14.27□□□□□ -0.13
PDLIM7-204ENST00000393546 IGKV1D-37A0A075B6S9 117 aa14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 APOHP02749 345 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 CD7P09564 240 aa14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 AKR1C1Q04828 323 aa14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 ST8SIA2Q92186 375 aa14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 NMES1Q9C002 83 aa14.26□□□□□ -0.13
PDLIM7-204ENST00000393546 TGP01266 2768 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms