RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 TMEM8BA6NDV4 472 aa11.15□□□□□ -0.62
GSE1-202ENST00000393243 TIMM23O14925 209 aa11.15□□□□□ -0.62
GSE1-202ENST00000393243 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
GSE1-202ENST00000393243 PATJQ8NI35 1801 aa11.15□□□□□ -0.62
GSE1-202ENST00000393243 COL4A1P02462 1669 aa11.15□□□□□ -0.62
GSE1-202ENST00000393243 ZNF688P0C7X2 276 aa11.15□□□□□ -0.63
GSE1-202ENST00000393243 SRSF7Q16629 238 aaKnown RBP eCLIP11.15□□□□□ -0.63
GSE1-202ENST00000393243 NR2C2APQ86WQ0 139 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
GSE1-202ENST00000393243 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 A0A0A6YYD4 124 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 SELLP14151 372 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 FAM57AQ8TBR7 257 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 C15orf61A6NNL5 157 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 CCL1P22362 96 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 EFNB3Q15768 340 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 SIPA1L3O60292 1781 aaPredicted RBP11.14□□□□□ -0.63
GSE1-202ENST00000393243 CYSLTR1Q9Y271 337 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 A0A1W2PR77 199 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 M0R2P5 195 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 FAM181AQ8N9Y4 354 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
GSE1-202ENST00000393243 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 TCRAP04437 139 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 FREM3P0C091 2139 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 ERVK11-1P61568 191 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 PMS2P5A8MQ11 134 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 A8MXK9 166 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 MYOD1P15172 320 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 TMEM30BQ3MIR4 351 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 LURAP1LQ8IV03 231 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
GSE1-202ENST00000393243 WBP1Q96G27 269 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 DOCK9Q9BZ29 2069 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
GSE1-202ENST00000393243 GREB1Q4ZG55 1949 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 SAP30O75446 220 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 CXCL1P09341 107 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 ASCL4Q6XD76 172 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 ZNF319Q9P2F9 582 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 SPRR3Q9UBC9 169 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 TIMP3P35625 211 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 PAX4O43316 350 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 IGLV3-21P80748 117 aaPredicted RBP11.12□□□□□ -0.63
GSE1-202ENST00000393243 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 RPUSD1Q9UJJ7 312 aaKnown RBP11.12□□□□□ -0.63
GSE1-202ENST00000393243 STRCP1A6NGW2 1772 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 TMEM133Q9H2Q1 129 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
GSE1-202ENST00000393243 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 A0A087WWC5 75 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 BMPERQ8N8U9 685 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 DOPEY2Q9Y3R5 2298 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 A0A087X0K7 114 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 D6R8Y8 96 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 BTCP35070 178 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 LINC00205P59089 165 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 PAX8Q06710 450 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 KLF17Q5JT82 389 aaPredicted RBP11.11□□□□□ -0.63
GSE1-202ENST00000393243 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 INS-IGF2F8WCM5 200 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 SMKR1H3BMG3 65 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 INSP01308 110 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 FOXF2Q12947 444 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 C8orf46Q8TAG6 207 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 JPT2Q9H910 190 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 Q8TAT8 98 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 IFI27L1Q96BM0 104 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 TRBV6-7A0A0A0MS04 114 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 H0YIZ8 118 aa11.11□□□□□ -0.63
GSE1-202ENST00000393243 PLNP26678 52 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms