RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 POLEQ07864 2286 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 MGST1P10620 155 aaKnown RBP12.22□□□□□ -0.45
SHTN1-204ENST00000392903 ERASQ7Z444 233 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 FAM90A1Q86YD7 464 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 ZNF596Q8TC21 504 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 CALYQ9NYX4 217 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 WASHC3Q9Y3C0 194 aa12.22□□□□□ -0.45
SHTN1-204ENST00000392903 OR2T8A6NH00 312 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 NPY1RP25929 384 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 CCL8P80075 99 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 RNASEKQ6P5S7 137 aaKnown RBP12.21□□□□□ -0.45
SHTN1-204ENST00000392903 WFDC8Q8IUA0 241 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 SNRNP40Q96DI7 357 aaKnown RBP12.21□□□□□ -0.45
SHTN1-204ENST00000392903 MBD6Q96DN6 1003 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 ZNF503Q96F45 646 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 JPT1Q9UK76 154 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 TCF19Q9Y242 345 aa12.21□□□□□ -0.45
SHTN1-204ENST00000392903 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
SHTN1-204ENST00000392903 OR4C46A6NHA9 309 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 FNDC10F2Z333 226 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 K7ERU9 68 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 ACTL6BO94805 426 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 NUDT3O95989 172 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 CA1P00915 261 aaPredicted RBP12.21□□□□□ -0.46
SHTN1-204ENST00000392903 REG1BP48304 166 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 ERVK-16P61578 105 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 C12orf54Q6X4T0 127 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 FAM168AQ92567 244 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 CCL13Q99616 98 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 SPOCK3Q9BQ16 436 aa12.21□□□□□ -0.46
SHTN1-204ENST00000392903 A0A1W2PRE2 83 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 PRRG2O14669 202 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 IGFBP2P18065 325 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 CA7P43166 264 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 MFAP2P55001 183 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 PRR27Q6MZM9 219 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 KIR3DL3Q8N743 410 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 IFI27L2Q9H2X8 130 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 NBASA2RRP1 2371 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 RPL8P62917 257 aaKnown RBP12.2□□□□□ -0.46
SHTN1-204ENST00000392903 FOXC1Q12948 553 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
SHTN1-204ENST00000392903 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 CR1LQ2VPA4 569 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 FAM120AOSQ5T036 256 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 SLC25A34Q6PIV7 304 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 ST6GALNAC6Q969X2 333 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 NABP2Q9BQ15 211 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 TP73-AS1Q9UF72 201 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 TANC2Q9HCD6 1990 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 MUC21A0A0G2JKD1 596 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 MUC21A0A140T8X8 626 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 F2RL2O00254 374 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 C3orf36Q3SXR2 165 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 CT45A1Q5HYN5 189 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 MUC21Q5SSG8 566 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 FAM162BQ5T6X4 162 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 Q8NA96 180 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 NUP35Q8NFH5 326 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 CT45A3Q8NHU0 189 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 SSBP3Q9BWW4 388 aaPredicted RBP12.19□□□□□ -0.46
SHTN1-204ENST00000392903 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
SHTN1-204ENST00000392903 IGF2RP11717 2491 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 C16orf97H3BN30 126 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 OR7C2O60412 319 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 GATA4P43694 442 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
SHTN1-204ENST00000392903 TMEM108Q6UXF1 575 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 GFRALQ6UXV0 394 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 S1PR3Q99500 378 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 CLEC5AQ9NY25 188 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 GAGE12BA1L429 117 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 CD5LO43866 347 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 CGB3P0DN86 165 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 CGB7P0DN87 165 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 TAS2R45P59539 299 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 C19orf24Q9BVV8 132 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 ZNF355PQ9NSJ1 428 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 TNCP24821 2201 aa12.18□□□□□ -0.46
SHTN1-204ENST00000392903 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 PSG9Q00887 426 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 NUDT11Q96G61 164 aa12.17□□□□□ -0.46
SHTN1-204ENST00000392903 GAFA1Q96PS6 74 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1173.7 ms