RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 C9orf118A6NHY6 69 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 B9A039 149 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 PPYP01298 95 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 IGKV1-13P0DP09 117 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 KIR2DS4P43632 304 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 SSBP2P81877 361 aaPredicted RBP15.49■□□□□ 0.07
CCDC50-202ENST00000392456 EDDM3AQ14507 147 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 KIR2DS1Q14954 304 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 FGFRL1Q8N441 504 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 ZNF808Q8N4W9 903 aaPredicted RBP15.49■□□□□ 0.07
CCDC50-202ENST00000392456 GPHA2Q96T91 129 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 COMMD5Q9GZQ3 224 aa15.49■□□□□ 0.07
CCDC50-202ENST00000392456 FAM208BQ5VWN6 2430 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 SERF2P84101 59 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 Q56UQ5 140 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 SLC25A34Q6PIV7 304 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 OR5A1Q8NGJ0 315 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 OR2K2Q8NGT1 345 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 TSKUQ8WUA8 353 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 SLC39A9Q9NUM3 307 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 DOCK11Q5JSL3 2073 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 TNFRSF1AP19438 455 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 RPL24P83731 157 aaKnown RBP15.48■□□□□ 0.07
CCDC50-202ENST00000392456 MEF2CQ06413 473 aaPredicted RBP15.48■□□□□ 0.07
CCDC50-202ENST00000392456 ZNF843Q8N446 348 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 SCGB1C1Q8TD33 95 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 GATAD1Q8WUU5 269 aa15.48■□□□□ 0.07
CCDC50-202ENST00000392456 SNURFLB1AK76 121 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 LYNX1G3V0Z9 82 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 LYNX1P0DP58 116 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 SPATA31B1PQ5VZV4 182 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 OR13A1Q8NGR1 328 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 MBD6Q96DN6 1003 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 CCL13Q99616 98 aa15.47■□□□□ 0.07
CCDC50-202ENST00000392456 TRBV9A0A0B4J1U6 114 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 TMEM30CPA0ZSE6 113 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 ZNF207O43670 478 aaKnown RBP15.46■□□□□ 0.07
CCDC50-202ENST00000392456 HLA-DRB1P01911 266 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 ZNF90Q03938 601 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 SLC35E4Q6ICL7 350 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 OR1L1Q8NH94 360 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 PERPQ96FX8 193 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 C12orf77C9JDV5 145 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 VDAC1P21796 283 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 NPY1RP25929 384 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 IER3P46695 156 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 PAX9P55771 341 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 HIST1H1AQ02539 215 aaPredicted RBP15.46■□□□□ 0.07
CCDC50-202ENST00000392456 FAM216BQ8N7L0 139 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 OR8B3Q8NGG8 313 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 OR8B2Q96RD0 313 aa15.46■□□□□ 0.07
CCDC50-202ENST00000392456 RAI1Q7Z5J4 1906 aaPredicted RBP15.46■□□□□ 0.06
CCDC50-202ENST00000392456 UBR5O95071 2799 aaPredicted RBP15.46■□□□□ 0.06
CCDC50-202ENST00000392456 MDFIC2A0A1B0GVS7 189 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 TUSC2O75896 110 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 SERPINE2P07093 398 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 SSTR5P35346 364 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 PPOXP50336 477 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 OR10G8Q8NGN5 311 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 RFESDQ8TAC1 157 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 AP1S3Q96PC3 154 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 MRPL16Q9NX20 251 aaKnown RBP15.45■□□□□ 0.06
CCDC50-202ENST00000392456 CLDN1O95832 211 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 FRMD6-AS1P0C7T7 363 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 EBLN2Q6P2I7 272 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 FOXI2Q6ZQN5 318 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF114Q8NC26 417 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 SPIN2AQ99865 258 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 SPIN2BQ9BPZ2 258 aa15.45■□□□□ 0.06
CCDC50-202ENST00000392456 C3orf85A0A1B0GTC6 90 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 OOEPA6NGQ2 149 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 TMEM178BH3BS89 294 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 LY6HO94772 140 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 NTF3P20783 257 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 SEC11AP67812 179 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 ID3Q02535 119 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 SPATA12Q7Z6I5 190 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 GAFA1Q96PS6 74 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 GNB1LQ9BYB4 327 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 VPS13CQ709C8 3753 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 H3BRM9 83 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 TNFRSF13BO14836 293 aaPredicted RBP15.44■□□□□ 0.06
CCDC50-202ENST00000392456 CHST1O43916 411 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 FCN3O75636 299 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 HERV-K104P61576 105 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 RPP25LQ8N5L8 163 aaKnown RBP15.44■□□□□ 0.06
CCDC50-202ENST00000392456 TMEM222Q9H0R3 208 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 IL36BQ9NZH7 164 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 SPG11Q96JI7 2443 aa15.44■□□□□ 0.06
CCDC50-202ENST00000392456 SIVA1O15304 175 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 LGALS4P56470 323 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 TEX36Q5VZQ5 186 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 ZNF818PQ6ZRF7 136 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 C19orf24Q9BVV8 132 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 CCL28Q9NRJ3 127 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 CENPEQ02224 2701 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 IGKV1D-33P01593 117 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 IGKV1-33P01594 117 aa15.43■□□□□ 0.06
CCDC50-202ENST00000392456 HBZP02008 142 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms