RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FBP1P09467 338 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 OR5G3P0C626 314 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 NPBWR1P48145 328 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 MEF2BQ02080 365 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 PTPN13Q12923 2485 aa9.05□□□□□ -0.96
SMARCAL1-203ENST00000392128 J3QLI3 93 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 ZNF90Q03938 601 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 FAM78BQ5VT40 261 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 SPNS3Q6ZMD2 512 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 NANPQ8TBE9 248 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 GATAD1Q8WUU5 269 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 RNF2Q99496 336 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 TNFRSF19Q9NS68 423 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 EGR2P11161 476 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 RPL35P42766 123 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 CD81P60033 236 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 KLF17Q5JT82 389 aaPredicted RBP9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 Q5PR19 223 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 SPATA31B1PQ5VZV4 182 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 PRSS57Q6UWY2 283 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 OR4X1Q8NH49 305 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 MRPL32Q9BYC8 188 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 CHTOPQ9Y3Y2 248 aaKnown RBP9.04□□□□□ -0.96
SMARCAL1-203ENST00000392128 CR1P17927 2039 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 K7EIM0 57 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 AVPP01185 164 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 FAM90A2PQ658T7 463 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 C5orf56Q8N8D9 126 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 OR1L4Q8NGR5 311 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 TMEM37Q8WXS4 190 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 PFDN5Q99471 154 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 IGHV3-21A0A0B4J1V1 117 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 DNASE2O00115 360 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 PAGE4O60829 102 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 GCHFRP30047 84 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 SGMS2Q8NHU3 365 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 DNAJC4Q9NNZ3 241 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 MOB4Q9Y3A3 225 aa9.03□□□□□ -0.96
SMARCAL1-203ENST00000392128 AKR1D1P51857 326 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 CEBPGP53567 150 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 TAS2R45P59539 299 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 RAB4BP61018 213 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 MAJINQ3KP22 176 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 SSX3Q99909 188 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 TXNDC17Q9BRA2 123 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 IGLC1P0CG04 106 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 AWAT1Q58HT5 328 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 POLQO75417 2590 aa9.02□□□□□ -0.97
SMARCAL1-203ENST00000392128 ELOA3CA0A087WX78 387 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 H3BQ15 152 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 COX7A2P2O60397 106 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 TGFAP01135 160 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 SMIM6P0DI80 62 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 IGHV4-31P0DP07 118 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 S100PP25815 95 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 KLK9Q2XQG4 91 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 FAM74A3Q4VXF1 159 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 C10orf113Q5VZT2 155 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 KRTAP1-3Q8IUG1 177 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 OR4F5Q8NH21 305 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 ZNF48Q96MX3 618 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 OR4F4Q96R69 305 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 NIPSNAP3BQ9BS92 247 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 THYN1Q9P016 225 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 KLK9Q9UKQ9 250 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 PUS1Q9Y606 427 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 M0R036 132 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 ATP6V0E1O15342 81 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 C8orf88P0DMB2 117 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 PLP1P60201 277 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 RHEBQ15382 184 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 PATE2Q6UY27 113 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 TMEM219Q86XT9 240 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 FAM110DQ8TAY7 271 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 ZFHX3Q15911 3703 aa9.01□□□□□ -0.97
SMARCAL1-203ENST00000392128 PDE6DO43924 150 aa9□□□□□ -0.97
SMARCAL1-203ENST00000392128 ZNF503Q96F45 646 aa9□□□□□ -0.97
SMARCAL1-203ENST00000392128 Q96MF0 132 aa9□□□□□ -0.97
SMARCAL1-203ENST00000392128 OR51M1Q9H341 326 aa9□□□□□ -0.97
SMARCAL1-203ENST00000392128 SOX21Q9Y651 276 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms