RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 GABARAPL2P60520 117 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 HBBP68871 147 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 RBMY1FQ15415 496 aaKnown RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 LGALSLQ3ZCW2 172 aaPredicted RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 TMEM155Q4W5P6 130 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 FAM182AQ5T1J6 154 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 OR2T2Q6IF00 324 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 MARCH3Q86UD3 253 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 MORN4Q8NDC4 146 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 PRSS3P2Q8NHM4 247 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 FAM104AQ969W3 186 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 IMMP2LQ96T52 175 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 HDHD3Q9BSH5 251 aaPredicted RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 PLEKHF2Q9H8W4 249 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 ZNF286AQ9HBT8 521 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 BCL2L10Q9HD36 194 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 SIX2Q9NPC8 291 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 ZNF492Q9P255 531 aa2.54□□□□□ -2
TRAJ17-201ENST00000390520 F11RQ9Y624 299 aaKnown RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 MYO18AQ92614 2054 aaKnown RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 MARF1Q9Y4F3 1742 aaKnown RBP2.54□□□□□ -2
TRAJ17-201ENST00000390520 IQGAP3Q86VI3 1631 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ABCA6Q8N139 1617 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ABCA8O94911 1581 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 SYCP2Q9BX26 1530 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 POLEQ07864 2286 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 RPRD2Q5VT52 1461 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 BLMP54132 1417 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 ANKARQ7Z5J8 1434 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 RAI1Q7Z5J4 1906 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 TRBV20-1A0A075B6N2 111 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 TRGV5A0A0B4J1U4 118 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 IGHV7-81A0A0B4J1V7 117 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 TRGV8A0A0C4DH27 118 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 MUC21A0A0G2JKD1 596 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 A0A1W2PP18 115 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 DNAJC9-AS1A6NH13 148 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 MCRIP1C9JLW8 97 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 INAFM1C9JVW0 142 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 H3BT86 120 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 M0R129 80 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 PLA2G10O15496 165 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 SYNGR2O43760 224 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 LTAP01374 205 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 IGLV2-8P01709 118 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 TRACP01848 142 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 IGHA1P01876 353 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 GYPAP02724 150 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 SRP19P09132 144 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF883P0CG24 379 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF705DP0CH99 300 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 SLC25A6P12236 298 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF823P16415 610 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 HLA-DMBP28068 263 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF136P52737 540 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 CRISP3P54108 245 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 RPL23P62829 140 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 SEC11AP67812 179 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 Q0VFX4 171 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ODF3L2Q3SX64 289 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 H2AFVQ71UI9 128 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 SLC25A42Q86VD7 318 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 BPIFA4PQ86YQ2 179 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 GPHB5Q86YW7 130 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 CSNK1G2-AS1Q8NCQ2 148 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF555Q8NEP9 628 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 OR5H2Q8NGV7 314 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 STAG3L4Q8TBR4 150 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 TAF15Q92804 592 aaKnown RBP eCLIP2.53□□□□□ -2
TRAJ17-201ENST00000390520 LSM10Q969L4 123 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 RBMXL1Q96E39 390 aaKnown RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 TIMM17AQ99595 171 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 C6orf106Q9H6K1 298 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
TRAJ17-201ENST00000390520 COL24A1Q17RW2 1714 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 PIK3C2AO00443 1686 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 TET3O43151 1660 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 MADDQ8WXG6 1647 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 CC2D2AQ9P2K1 1620 aa2.53□□□□□ -2
TRAJ17-201ENST00000390520 URB2Q14146 1524 aaKnown RBP2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 HCFC1P51610 2035 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 EML6Q6ZMW3 1958 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 IQSEC2Q5JU85 1478 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 MYLKQ15746 1914 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 TRPM3Q9HCF6 1732 aaPredicted RBP2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 IGKV1-9A0A0C4DH69 117 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 BUB1B-PAK6H3BSN5 160 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 HYPMO75409 117 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 GABARAPO95166 117 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 SOD1P00441 154 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 IGHV3-48P01763 117 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 C1QAP02745 245 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 HLA-DPB1P04440 258 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 CXCL1P09341 107 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 INAFM2P0DMQ5 153 aa2.52□□□□□ -2.01
TRAJ17-201ENST00000390520 POLR2JP52435 117 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms