RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 SPI1P17947 270 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 PMAIP1Q13794 54 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 KISS1Q15726 138 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 LPCAT4Q643R3 524 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 Q6ZQT0 140 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 MIR17HGQ75NE6 70 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 OBSCN-AS1Q96MR7 158 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR52E6Q96RD3 313 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 TMEM147Q9BVK8 224 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR51I1Q9H343 314 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 PRTFDC1Q9NRG1 225 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 ATP6V1DQ9Y5K8 247 aa0.57□□□□□ -2.32
RNU6-39P-201ENST00000384344 MED12LQ86YW9 2145 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 SPTA1P02549 2419 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 IGKV1D-42A0A075B6H8 117 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 EEF1E1-BLOC1S5C9J1V9 151 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 KCNK1O00180 336 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 PSMD12O00232 456 aaPredicted RBP0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 CETN3O15182 167 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR2B3O76000 313 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 MIFP14174 115 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 PDE6HQ13956 83 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 RHEBQ15382 184 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 HIST3H3Q16695 136 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 SFXN4Q6P4A7 337 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 CLVS1Q8IUQ0 354 aaPredicted RBP0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 C20orf196Q8IYI0 205 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR5A1Q8NGJ0 315 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 SLC39A9Q9NUM3 307 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 TAS2R4Q9NYW5 299 aa0.56□□□□□ -2.32
RNU6-39P-201ENST00000384344 PQLC2LA1A4F0 135 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 C2orf70A6NJV1 201 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 PROSCO94903 275 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 UBL3O95164 117 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 TNNC2P02585 160 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 CRYGAP11844 174 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 PSME3P61289 254 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 MAGOHP61326 146 aaKnown RBP0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 RHOGP84095 191 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 OR51D1Q8NGF3 324 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 ZNF418Q8TF45 676 aaPredicted RBP0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 C4orf3Q8WVX3 66 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 XPNPEP1Q9NQW7 623 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 NHP2Q9NX24 153 aaKnown RBP0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 FBXL12Q9NXK8 326 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 RASL12Q9NYN1 266 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 LAMA3Q16787 3333 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 CFAP54Q96N23 3096 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 LAMB4A4D0S4 1761 aa0.55□□□□□ -2.32
RNU6-39P-201ENST00000384344 MUC12Q9UKN1 5478 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 ASPMQ8IZT6 3477 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 RAPGEF6Q8TEU7 1601 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 TRAV9-1A0A075B6T8 112 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 M0R2N4 97 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 IGKV1-5P01602 117 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 HLA-DRB1P01911 266 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 CALB1P05937 261 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 CD79AP11912 226 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 CCDC122Q5T0U0 273 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 HIST3H2BBQ8N257 126 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 SFT2D1Q8WV19 159 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 SLC35B4Q969S0 331 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 TOMM6Q96B49 74 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 IMP4Q96G21 291 aaKnown RBP0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 BRCA2P51587 3418 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 RP1P56715 2156 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 HTTP42858 3142 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 FAT3Q8TDW7 4589 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
RNU6-39P-201ENST00000384344 NCOA6Q14686 2063 aaPredicted RBP0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 NHSL1Q5SYE7 1610 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 KDM5AP29375 1690 aaKnown RBP0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 TRAV1-1A0A0B4J248 108 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 DPRXA6NFQ7 191 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 C19orf84I3L1E1 186 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 SULT1B1O43704 296 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 SPCS3P61009 180 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 SPOPLQ6IQ16 392 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 TRAPPC6BQ86SZ2 158 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 TERB2Q8NHR7 220 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 KLK6Q92876 244 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 NIPSNAP1Q9BPW8 284 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 ERGIC3Q9Y282 383 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 TMEM56-RWDD3S4R434 201 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 HEATR5AQ86XA9 2040 aa0.53□□□□□ -2.32
RNU6-39P-201ENST00000384344 TOPBP1Q92547 1522 aa0.53□□□□□ -2.33
RNU6-39P-201ENST00000384344 CENPFP49454 3210 aa0.53□□□□□ -2.33
RNU6-39P-201ENST00000384344 DCHS1Q96JQ0 3298 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 TRBV6-8A0A0A6YYG3 113 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 TGOLN2O43493 480 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 MGST1P10620 155 aaKnown RBP0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 S100A4P26447 101 aaKnown RBP0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 SSR2P43308 183 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 SNRPD2P62316 118 aaKnown RBP0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 RNASE10Q5GAN6 216 aaKnown RBP0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 ANKRD29Q8N6D5 301 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 SIGLECL1Q8N7X8 197 aa0.52□□□□□ -2.33
RNU6-39P-201ENST00000384344 H1FXQ92522 213 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms