RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 GLMPQ8WWB7 406 aa12.91□□□□□ -0.34
RPUSD3-201ENST00000383820 RAB40CQ96S21 281 aa12.91□□□□□ -0.34
RPUSD3-201ENST00000383820 MTFP1Q9UDX5 166 aa12.91□□□□□ -0.34
RPUSD3-201ENST00000383820 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 FAM25AB3EWG3 89 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 FAM25CB3EWG5 89 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 FAM25GB3EWG6 89 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 RORCP51449 518 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 NUTF2P61970 127 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 SP6Q3SY56 376 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 OR52I2Q8NH67 350 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 RNASEH2CQ8TDP1 164 aaKnown RBP12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 CLEC5AQ9NY25 188 aa12.9□□□□□ -0.34
RPUSD3-201ENST00000383820 GABARAPO95166 117 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 CDS2O95674 445 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 CD74P04233 296 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 RNASE12Q5GAN4 147 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 PSMG4Q5JS54 123 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 PRSS54Q6PEW0 395 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 Q6ZRM9 215 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
RPUSD3-201ENST00000383820 PCLOQ9Y6V0 5065 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 DEFB131BA0A096LNP1 70 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 P0DMU3 169 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 FAM231AP0DMU4 169 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 FAM231CP0DMU5 169 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 OR10J1P30954 320 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 RND2P52198 227 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 C12orf74Q32Q52 190 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 TMEM229BQ8NBD8 167 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 AP3S1Q92572 193 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 ABHD1Q96SE0 405 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
RPUSD3-201ENST00000383820 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 NPY1RP25929 384 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 TAS2R19P59542 299 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 DHODHQ02127 395 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 POM121L12Q8N7R1 296 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 RBPMSQ93062 196 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 CACFD1Q9UGQ2 172 aa12.87□□□□□ -0.35
RPUSD3-201ENST00000383820 H3BMM0 161 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 GSTZ1O43708 216 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 NOL3O60936 208 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 RAB3DO95716 219 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 USF2Q15853 346 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 CTF1Q16619 201 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 SCGB2B2Q4G0G5 96 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 NOXA1Q86UR1 476 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 OR4D10Q8NGI6 311 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 NEU1Q99519 415 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 NDUFAF3Q9BU61 184 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 EXTL2Q9UBQ6 330 aa12.86□□□□□ -0.35
RPUSD3-201ENST00000383820 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 A0A1B0GVY2 172 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 BUB3O43684 328 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 IL4P05112 153 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 OR5AC1P0C628 307 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 SSBP1Q04837 148 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 CACNG5Q9UF02 275 aa12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-201ENST00000383820 CEBPZOSA8MTT3 80 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 TOMM40O96008 361 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 NAA60Q9H7X0 242 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
RPUSD3-201ENST00000383820 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 GABARAPH6UMI1 98 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 RGS5O15539 181 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 RD3LP0DJH9 198 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 MEF2DQ14814 521 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 TMEM170AQ8WVE7 144 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
RPUSD3-201ENST00000383820 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms