RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ANK3Q12955 4377 aaKnown RBP20.95■□□□□ 0.94
MSX1-201ENST00000382723 TRBV9A0A0B4J1U6 114 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 H2AFB1P0C5Y9 115 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 PPIFP30405 207 aaKnown RBP20.95■□□□□ 0.94
MSX1-201ENST00000382723 ZNF726P1Q15940 193 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 C15orf32Q32M92 178 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 FAM122CQ6P4D5 195 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 ZNF702PQ9H963 129 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 ESM1Q9NQ30 184 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 C21orf62Q9NYP8 219 aa20.95■□□□□ 0.94
MSX1-201ENST00000382723 CLN5O75503 358 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 MFAP4P55083 255 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 SSX7Q7RTT5 188 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 SFT2D1Q8WV19 159 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 RCC1LQ96I51 464 aaKnown RBP20.94■□□□□ 0.94
MSX1-201ENST00000382723 IGLC1P0CG04 106 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 KLK9Q2XQG4 91 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 Q56UQ5 140 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 NECAP1Q8NC96 275 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 TRGV9Q99603 122 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 SLC25A22Q9H936 323 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 KLK9Q9UKQ9 250 aa20.94■□□□□ 0.94
MSX1-201ENST00000382723 TIGITQ495A1 244 aa20.93■□□□□ 0.94
MSX1-201ENST00000382723 NPBWR1P48145 328 aa20.92■□□□□ 0.94
MSX1-201ENST00000382723 LCN15Q6UWW0 184 aa20.92■□□□□ 0.94
MSX1-201ENST00000382723 HMGB3O15347 200 aaKnown RBP20.92■□□□□ 0.94
MSX1-201ENST00000382723 GNG7O60262 68 aa20.92■□□□□ 0.94
MSX1-201ENST00000382723 TRGV3P03979 118 aa20.92■□□□□ 0.94
MSX1-201ENST00000382723 CITED4Q96RK1 184 aa20.92■□□□□ 0.94
MSX1-201ENST00000382723 INAFM1C9JVW0 142 aa20.91■□□□□ 0.94
MSX1-201ENST00000382723 ZNF329Q86UD4 541 aa20.91■□□□□ 0.94
MSX1-201ENST00000382723 VN1R17PQ8TDU5 208 aa20.91■□□□□ 0.94
MSX1-201ENST00000382723 ACTR3CQ9C0K3 210 aaPredicted RBP20.91■□□□□ 0.94
MSX1-201ENST00000382723 FAM181BA6NEQ2 426 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 F8W735 103 aaPredicted RBP20.9■□□□□ 0.94
MSX1-201ENST00000382723 TPPP2P59282 170 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 SELENOTP62341 195 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 LYPD6BQ8NI32 183 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 MED9Q9NWA0 146 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 HIVEP2P31629 2446 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 IGKV1-17P01599 117 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 PF4V1P10720 104 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 CFHR3Q02985 330 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 DOK5Q9P104 306 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 ZNF580Q9UK33 172 aa20.9■□□□□ 0.94
MSX1-201ENST00000382723 OR2T8A6NH00 312 aa20.89■□□□□ 0.93
MSX1-201ENST00000382723 CDC34P49427 236 aaPredicted RBP20.89■□□□□ 0.93
MSX1-201ENST00000382723 FGF8P55075 233 aaPredicted RBP20.89■□□□□ 0.93
MSX1-201ENST00000382723 ATP5G2Q06055 141 aa20.89■□□□□ 0.93
MSX1-201ENST00000382723 ZNF418Q8TF45 676 aaPredicted RBP20.89■□□□□ 0.93
MSX1-201ENST00000382723 RAB24Q969Q5 203 aa20.89■□□□□ 0.93
MSX1-201ENST00000382723 A0A1W2PPV4 95 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 SPSB3Q6PJ21 355 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 LCNL1Q6ZST4 164 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 ZNF502Q8TBZ5 544 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 MARC2Q969Z3 335 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 KLK15Q9H2R5 256 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 CTXND1A0A1B0GTU2 59 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 MAP1LC3B2A6NCE7 125 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 FAM223BA6NKX1 122 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 CCL20P78556 96 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 FAM223AQ8IWN6 122 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 MAP1LC3BQ9GZQ8 125 aa20.88■□□□□ 0.93
MSX1-201ENST00000382723 H3BUA1 57 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 IGLV1-40P01703 118 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 PSG1P11464 419 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 MBD3L1Q8WWY6 194 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 EEF1AKMT3Q96AZ1 226 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 SEPSECSQ9HD40 501 aaKnown RBP20.87■□□□□ 0.93
MSX1-201ENST00000382723 HIVEP1P15822 2718 aa20.87■□□□□ 0.93
MSX1-201ENST00000382723 TRAV30A0A087WSZ9 112 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 SPATA31B1PQ5VZV4 182 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 C10orf99Q6UWK7 81 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 TXN2Q99757 166 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 SEC14L6B5MCN3 397 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 RD3LP0DJH9 198 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 GPR183P32249 361 aa20.86■□□□□ 0.93
MSX1-201ENST00000382723 CYSRT1A8MQ03 144 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 CLDN34H7C241 214 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 COX7A2P2O60397 106 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 HBE1P02100 147 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 ORM2P19652 201 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 FAM78BQ5VT40 261 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 CLEC19AQ6UXS0 136 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 IL34Q6ZMJ4 242 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 Q8N2B8 174 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 TMEM37Q8WXS4 190 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 CCDC140Q96MF4 163 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 MTORP42345 2549 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 CUBNO60494 3623 aa20.85■□□□□ 0.93
MSX1-201ENST00000382723 CLEC3BP05452 202 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 RHOBP62745 196 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 OR1B1Q8NGR6 318 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 BRI3O95415 125 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 IGHG4P01861 327 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 FABP1P07148 127 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 OR5G3P0C626 314 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 FCGR2BP31994 310 aaPredicted RBP20.84■□□□□ 0.93
MSX1-201ENST00000382723 RAB9AP51151 201 aa20.84■□□□□ 0.93
MSX1-201ENST00000382723 CHRDL1Q9BU40 450 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms