RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TMEM116Q8NCL8 245 aa12.16□□□□□ -0.46
CTNS-202ENST00000381870 JKAMPQ9P055 326 aa12.16□□□□□ -0.46
CTNS-202ENST00000381870 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
CTNS-202ENST00000381870 Q5PR19 223 aa12.16□□□□□ -0.46
CTNS-202ENST00000381870 NANOS1Q8WY41 292 aaKnown RBP12.16□□□□□ -0.46
CTNS-202ENST00000381870 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
CTNS-202ENST00000381870 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 A6NDN8 102 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 CCL4P13236 92 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 PLP1P60201 277 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 MEF2CQ06413 473 aaPredicted RBP12.15□□□□□ -0.46
CTNS-202ENST00000381870 GUSBP1Q15486 140 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 PRR7Q8TB68 274 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 PERPQ96FX8 193 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 PAXXQ9BUH6 204 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 RPP21Q9H633 154 aaKnown RBP12.15□□□□□ -0.46
CTNS-202ENST00000381870 TNCP24821 2201 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
CTNS-202ENST00000381870 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
CTNS-202ENST00000381870 AZU1P20160 251 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 BMI1P35226 326 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 MRPL32Q9BYC8 188 aaKnown RBP12.14□□□□□ -0.47
CTNS-202ENST00000381870 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 IQCF6A8MYZ5 107 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 FOLR3P41439 243 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 CYB561P49447 251 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 FABP6P51161 128 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 VSTM2AQ8TAG5 236 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 NEU4Q8WWR8 484 aaPredicted RBP12.14□□□□□ -0.47
CTNS-202ENST00000381870 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 HES7Q9BYE0 225 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 TTC28Q96AY4 2481 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 DNAJC13O75165 2243 aa12.14□□□□□ -0.47
CTNS-202ENST00000381870 NDUFS8O00217 210 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 CHEK1O14757 476 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 AGFG2O95081 481 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 PLAUP00749 431 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 LOXL3P58215 753 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
CTNS-202ENST00000381870 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 THYN1Q9P016 225 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 JPT1Q9UK76 154 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 NCOR1O75376 2440 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 A0A1W2PPM0 123 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 MOSP00540 346 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 FAM87AP0C7U9 286 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 KIR2DS2P43631 304 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 SMAGPQ0VAQ4 97 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 TMEM108Q6UXF1 575 aa12.13□□□□□ -0.47
CTNS-202ENST00000381870 TEX48A0A1B0GUV7 120 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 A8MWL6 223 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 F2RL2O00254 374 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 MGST3O14880 152 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 FXYD5Q96DB9 178 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 COX7A2P2O60397 106 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 P01737 135 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 MAGEA5P43359 124 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PRCDQ00LT1 54 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PATE2Q6UY27 113 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 KLF14Q8TD94 323 aaPredicted RBP12.12□□□□□ -0.47
CTNS-202ENST00000381870 KNTC1P50748 2209 aa12.12□□□□□ -0.47
CTNS-202ENST00000381870 PPIAL4EA0A075B759 164 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 J3QW42 95 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 APOHP02749 345 aaPredicted RBP12.11□□□□□ -0.47
CTNS-202ENST00000381870 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
CTNS-202ENST00000381870 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
CTNS-202ENST00000381870 PPIAL4FP0DN26 164 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 IL11RAQ14626 422 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 BLNKQ8WV28 456 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 FZR1Q9UM11 496 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 BOKQ9UMX3 212 aaPredicted RBP12.11□□□□□ -0.47
CTNS-202ENST00000381870 PI4KAP42356 2102 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 PRDX2P32119 198 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
CTNS-202ENST00000381870 PPP1R32Q7Z5V6 425 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 ADTRPQ96IZ2 230 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 GPR82Q96P67 336 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
CTNS-202ENST00000381870 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 RNASE2P10153 161 aaKnown RBP12.1□□□□□ -0.47
CTNS-202ENST00000381870 ACP1P24666 158 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 HOXC12P31275 282 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 MYCNOSP40205 109 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 CD69Q07108 199 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
CTNS-202ENST00000381870 OR5A1Q8NGJ0 315 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms