RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SIGLEC9Q9Y336 463 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 CX3CL1P78423 397 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 LINC00527Q9UJ94 153 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 SLC17A3O00476 420 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 KIAA1644Q3SXP7 199 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 SMUG1Q53HV7 270 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 TEX36Q5VZQ5 186 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 FAM71F2Q6NXP2 309 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 LOXP28300 417 aaPredicted RBP10□□□□□ -0.81
GABPB1-203ENST00000380877 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
GABPB1-203ENST00000380877 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
GABPB1-203ENST00000380877 BRD3OSQ6XYD6 125 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 TMEM219Q86XT9 240 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 Q9H3A6 140 aa10□□□□□ -0.81
GABPB1-203ENST00000380877 GCGP01275 180 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 RPL23P62829 140 aaKnown RBP9.99□□□□□ -0.81
GABPB1-203ENST00000380877 C17orf58Q2M2W7 97 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 ZNF600Q6ZNG1 722 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 A0A1W2PRE2 83 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 HIST1H1AQ02539 215 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-203ENST00000380877 TMEM116Q8NCL8 245 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 CD5P06127 495 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 GPX1P07203 203 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 TAS2R60P59551 318 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
GABPB1-203ENST00000380877 C11orf53Q8IXP5 236 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 MGST2Q99735 147 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 YAE1D1Q9NRH1 226 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
GABPB1-203ENST00000380877 A6NNC1 897 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 TRGC1P0CF51 173 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 KLF17Q5JT82 389 aaPredicted RBP9.98□□□□□ -0.81
GABPB1-203ENST00000380877 NPFFO15130 113 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
GABPB1-203ENST00000380877 SEM1Q6ZVN7 128 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 ELOVL1Q9BW60 279 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 A0A087WWC5 75 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 TMEM50AO95807 157 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 CD99P14209 185 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 CBLN1P23435 193 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 CKS2P33552 79 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 PRSS22Q9GZN4 317 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 IGKV1-39P01597 117 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 IGKV1D-39P04432 117 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 GPR82Q96P67 336 aa9.98□□□□□ -0.81
GABPB1-203ENST00000380877 SRIP30626 198 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 CEP192Q8TEP8 1941 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 GPR61Q9BZJ8 451 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 MMP23AO75900 390 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 ARFGEF3Q5TH69 2177 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 TRAV5A0A0B4J249 113 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 H3BUX3 64 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 SEPSECSQ9HD40 501 aaKnown RBP9.97□□□□□ -0.81
GABPB1-203ENST00000380877 IL36BQ9NZH7 164 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
GABPB1-203ENST00000380877 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
GABPB1-203ENST00000380877 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.81
GABPB1-203ENST00000380877 AREGP15514 252 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 DLX1P56177 255 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 GNG5P63218 68 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 BEND2Q8NDZ0 799 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 NEU1Q99519 415 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 OTORQ9NRC9 128 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 ZNF98A6NK75 572 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 IGKV3-20P01619 116 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 PSG1P11464 419 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 SAA4P35542 130 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 C15orf32Q32M92 178 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 OR4X2Q8NGF9 303 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.81
GABPB1-203ENST00000380877 TBL2Q9Y4P3 447 aaKnown RBP9.96□□□□□ -0.81
GABPB1-203ENST00000380877 A0A1B0GWJ7 208 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 SHISA9B4DS77 424 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 ZNF418Q8TF45 676 aaPredicted RBP9.96□□□□□ -0.82
GABPB1-203ENST00000380877 FMC1Q96HJ9 113 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 PGPEP1LA6NFU8 196 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 OR8A1Q8NGG7 326 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 C8orf46Q8TAG6 207 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 VN1R17PQ8TDU5 208 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 DUX5Q96PT3 197 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 ATG101Q9BSB4 218 aa9.96□□□□□ -0.82
GABPB1-203ENST00000380877 TRBV9A0A0B4J1U6 114 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 ZNF134P52741 427 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 DDB2Q92466 427 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 GRIFINA4D1Z8 144 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 TSPOP30536 169 aa9.95□□□□□ -0.82
GABPB1-203ENST00000380877 MLANAQ16655 118 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms