RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TOMM40O96008 361 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 MAPK1IP1LQ8NDC0 245 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 KLF14Q8TD94 323 aaPredicted RBP9.04□□□□□ -0.96
CLCN4-202ENST00000380833 GDF15Q99988 308 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
CLCN4-202ENST00000380833 CASP8AP2Q9UKL3 1982 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TRPM3Q9HCF6 1732 aaPredicted RBP9.04□□□□□ -0.96
CLCN4-202ENST00000380833 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TIAF1O95411 115 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TNFRSF18Q9Y5U5 241 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TRBV5-3A0A0A0MS03 114 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 ATOX1O00244 68 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 UNC119Q13432 240 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 LY6G6FQ5SQ64 297 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 SIGLEC12Q96PQ1 595 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 IGHV3-73A0A0B4J1V6 119 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 KIR2DL5BA0A0G2JN68 375 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 KIR2DL5BA0A0G2JPC4 375 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 CGAP01215 116 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 KIR2DL5AQ8N109 375 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 CHD5Q8TDI0 1954 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 H7C1H1 209 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 RNF183Q96D59 192 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 CLEC7AQ9BXN2 247 aa9.04□□□□□ -0.96
CLCN4-202ENST00000380833 TIMP3P35625 211 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 H3BMG7 143 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 RPRMLQ8N4K4 120 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 A0A1B0GUL6 1792 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 IGHG4P01861 327 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
CLCN4-202ENST00000380833 SMCHD1A6NHR9 2005 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 GZMMP51124 257 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 KLRD1Q13241 179 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
CLCN4-202ENST00000380833 TRBV5-7A0A0A0MS05 114 aa9.02□□□□□ -0.96
CLCN4-202ENST00000380833 PPP1R32Q7Z5V6 425 aa9.02□□□□□ -0.96
CLCN4-202ENST00000380833 DDX60LQ5H9U9 1706 aaKnown RBP9.02□□□□□ -0.97
CLCN4-202ENST00000380833 C1orf100Q5SVJ3 147 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 OCC1Q8TAD7 63 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 ZG16O60844 167 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 FGFRL1Q8N441 504 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 BMPERQ8N8U9 685 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 MST1P26927 711 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 A0A1W2PPV9 198 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 PRSS29PA6NIE9 313 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 METRNQ9UJH8 293 aa9.02□□□□□ -0.97
CLCN4-202ENST00000380833 COX8AP10176 69 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 PRADC1Q9BSG0 188 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 SOCS3O14543 225 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 ORMDL2Q53FV1 153 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 GATAD1Q8WUU5 269 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 Q6ZWC4 215 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 DEFB125Q8N687 156 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 NPIPB3Q92617 1050 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 WFDC6Q9BQY6 131 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 CYTL1Q9NRR1 136 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 LOC102723996A0A087X1L8 192 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 CRPP02741 224 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 C10orf91Q5T1B1 145 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 SAXO1Q8IYX7 474 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 C8orf46Q8TAG6 207 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 F5P12259 2224 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 KDM3BQ7LBC6 1761 aa9.01□□□□□ -0.97
CLCN4-202ENST00000380833 IGHV1-24A0A0C4DH33 117 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 ACYP1P07311 99 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 RFPL3SP0C7P2 107 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 SAP25Q8TEE9 199 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 TRIP12Q14669 1992 aaPredicted RBP9□□□□□ -0.97
CLCN4-202ENST00000380833 RP1P56715 2156 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 CIARTQ8N365 385 aaPredicted RBP9□□□□□ -0.97
CLCN4-202ENST00000380833 CCDC88CQ9P219 2028 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 LCNL1Q6ZST4 164 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 RETNQ9HD89 108 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 SCN4AP35499 1836 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 A0A1W2PQD3 144 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 TCF15Q12870 199 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 OXLD1Q5BKU9 147 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 TMEM219Q86XT9 240 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 LSM4Q9Y4Z0 139 aaKnown RBP9□□□□□ -0.97
CLCN4-202ENST00000380833 USP54Q70EL1 1684 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 NAPSAO96009 420 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 TFF3Q07654 80 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 PKD1L3Q7Z443 1732 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 IGLV3-16A0A075B6K0 115 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 LINC01549A6NIU2 74 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 ZNF525Q8N782 197 aa9□□□□□ -0.97
CLCN4-202ENST00000380833 RPL34P49207 117 aaKnown RBP8.99□□□□□ -0.97
CLCN4-202ENST00000380833 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
CLCN4-202ENST00000380833 COX6A1P12074 109 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms