RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TRIOBPQ9H2D6 2365 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 C22orf46C9J442 243 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 GGACTQ9BVM4 153 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 C5orf67F2Z3F1 127 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 Q8TAT8 98 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
CHD3-203ENST00000380358 IGLV1-36A0A0B4J1U3 117 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 RUSC1-AS1Q66K80 236 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 MORN3Q6PF18 240 aaPredicted RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 DAD1P61803 113 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 ZNF660Q6AZW8 331 aaPredicted RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 MYO7BQ6PIF6 2116 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 ZNF98A6NK75 572 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 CACNA1IQ9P0X4 2223 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 LOC102723996A0A087X1L8 192 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 C4orf51C9J302 202 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 C1QL4Q86Z23 238 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
CHD3-203ENST00000380358 ABCA3Q99758 1704 aa10.34□□□□□ -0.75
CHD3-203ENST00000380358 CD5LO43866 347 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 SS18Q15532 418 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 ZNF345Q14585 488 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 Q5BKY6 102 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 LAMB1P07942 1786 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 GAGE1Q13065 139 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 GAGE4Q13068 117 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 GAGE5Q13069 117 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 ATP5L2Q7Z4Y8 100 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 DKK4Q9UBT3 224 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 IGKV1D-43A0A0B4J1Z2 117 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 RS1O15537 224 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 MTURNQ8N3F0 131 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 A0A0G2JK05 382 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 TPTE2P1Q5T6R2 138 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 SPSB3Q6PJ21 355 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 Q96MF0 132 aa10.33□□□□□ -0.76
CHD3-203ENST00000380358 TMEM105Q8N8V8 129 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 TMEM133Q9H2Q1 129 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 SELLP14151 372 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 FOXF2Q12947 444 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 TEX43Q6ZNM6 134 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 CIARTQ8N365 385 aaPredicted RBP10.32□□□□□ -0.76
CHD3-203ENST00000380358 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 SPTBN2O15020 2390 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 UBE2BP63146 152 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 ZNF407Q9C0G0 2248 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 IZUMO1RA6ND01 250 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 TM4SF5O14894 197 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 CA7P43166 264 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 POC1AQ8NBT0 407 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 H2BFSP57053 126 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
CHD3-203ENST00000380358 ZNF525Q8N782 197 aa10.32□□□□□ -0.76
CHD3-203ENST00000380358 A8MWV9 139 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.31□□□□□ -0.765e-6■■■□□ 16.7
CHD3-203ENST00000380358 DYSFO75923 2080 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 SERF1AO75920 110 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 DKK1O94907 266 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 TAL2Q16559 108 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 WDYHV1Q96HA8 205 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 FAM90A26D6RGX4 464 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 FAM209AQ5JX71 171 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 MAST2Q6P0Q8 1798 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 PLPPR1Q8TBJ4 325 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 MRPS18AQ9NVS2 196 aaKnown RBP10.31□□□□□ -0.76
CHD3-203ENST00000380358 A6NNC1 897 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 TBX6O95947 436 aaPredicted RBP10.31□□□□□ -0.76
CHD3-203ENST00000380358 PAX9P55771 341 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 CFHR1Q03591 330 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 KLF12Q9Y4X4 402 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 LEPROTO15243 131 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
CHD3-203ENST00000380358 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 OR9G9P0C7N8 305 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 ZNF672Q499Z4 452 aaPredicted RBP10.3□□□□□ -0.76
CHD3-203ENST00000380358 PILRAQ9UKJ1 303 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 DANCRP0C864 163 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms