RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 FAM231AP0DMU4 169 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 FAM231CP0DMU5 169 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 NPY1RP25929 384 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 OR10J1P30954 320 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 HTR2BP41595 481 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 SPCS3P61009 180 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 SNRPD3P62318 126 aaKnown RBP16.65■□□□□ 0.26
U2AF1-202ENST00000380276 C16orf54Q6UWD8 224 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 NDUFAF3Q9BU61 184 aa16.65■□□□□ 0.26
U2AF1-202ENST00000380276 AMBPP02760 352 aa16.64■□□□□ 0.25
U2AF1-202ENST00000380276 DHODHQ02127 395 aa16.64■□□□□ 0.25
U2AF1-202ENST00000380276 OR13C8Q8NGS7 320 aa16.64■□□□□ 0.25
U2AF1-202ENST00000380276 OR52I2Q8NH67 350 aa16.64■□□□□ 0.25
U2AF1-202ENST00000380276 GLMPQ8WWB7 406 aa16.64■□□□□ 0.25
U2AF1-202ENST00000380276 PRSS29PA6NIE9 313 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 CEBPZOSA8MTT3 80 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 IL4P05112 153 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 IGLC1P0CG04 106 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 UCP1P25874 307 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 BSXQ3C1V8 233 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 MZT2AQ6P582 158 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 Q6ZRM9 215 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 POM121L12Q8N7R1 296 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 MARCH1Q8TCQ1 289 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 SCRT1Q9BWW7 348 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 U3KQE9 123 aa16.63■□□□□ 0.25
U2AF1-202ENST00000380276 FAM90A26D6RGX4 464 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 TNFAIP8O95379 198 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 SLC25A4P12235 298 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 RORCP51449 518 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 EMP1P54849 157 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 PRSS54Q6PEW0 395 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 OR4D10Q8NGI6 311 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 FUNDC2Q9BWH2 189 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.62■□□□□ 0.25
U2AF1-202ENST00000380276 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
U2AF1-202ENST00000380276 IGHV3OR16-12A0A075B7B8 117 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 TEX13DA0A0J9YY54 714 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-202ENST00000380276 NXPH3O95157 252 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 OR5AC1P0C628 307 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 TBPP20226 339 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 USF2Q15853 346 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-202ENST00000380276 SIGLEC15Q6ZMC9 328 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 FAM219AQ8IW50 185 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 UBE2DNLQ8IWF7 75 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 SLC24A4Q8NFF2 622 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 TERB2Q8NHR7 220 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 ACY3Q96HD9 319 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 NRN1Q9NPD7 142 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 CACNG5Q9UF02 275 aa16.61■□□□□ 0.25
U2AF1-202ENST00000380276 C14orf166Q9Y224 244 aaKnown RBP16.61■□□□□ 0.25
U2AF1-202ENST00000380276 RAB3DO95716 219 aa16.6■□□□□ 0.25
U2AF1-202ENST00000380276 IGKV3-20P01619 116 aa16.6■□□□□ 0.25
U2AF1-202ENST00000380276 YPEL3P61236 119 aaPredicted RBP16.6■□□□□ 0.25
U2AF1-202ENST00000380276 RNASEH2CQ8TDP1 164 aaKnown RBP16.6■□□□□ 0.25
U2AF1-202ENST00000380276 A0A1B0GVY2 172 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 H3BMM0 161 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 GSTZ1O43708 216 aaPredicted RBP16.59■□□□□ 0.25
U2AF1-202ENST00000380276 B3GALNT1O75752 331 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 IFNA10P01566 189 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 FXYD7P58549 80 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 TAS2R19P59542 299 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 C2orf83Q53S99 150 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 ETFRF1Q6IPR1 90 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 OR52E5Q8NH55 327 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 NPIPB3Q92617 1050 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 MTFP1Q9UDX5 166 aa16.59■□□□□ 0.25
U2AF1-202ENST00000380276 RD3LP0DJH9 198 aa16.58■□□□□ 0.24
U2AF1-202ENST00000380276 TMEM229BQ8NBD8 167 aa16.58■□□□□ 0.24
U2AF1-202ENST00000380276 AP3S1Q92572 193 aa16.58■□□□□ 0.24
U2AF1-202ENST00000380276 RBPMSQ93062 196 aaKnown RBP16.58■□□□□ 0.24
U2AF1-202ENST00000380276 TMEM222Q9H0R3 208 aa16.58■□□□□ 0.24
U2AF1-202ENST00000380276 IGLV2-18A0A075B6J9 118 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 SPART-AS1P0CW21 52 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 MEF2DQ14814 521 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 TMEM268Q5VZI3 342 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 FAAP20Q6NZ36 180 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 STEAP1BQ6NZ63 245 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 LHFPL5Q8TAF8 219 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 GPR146Q96CH1 333 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 LINC00052Q96N35 136 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 PBDC1Q9BVG4 233 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 NAA60Q9H7X0 242 aa16.57■□□□□ 0.24
U2AF1-202ENST00000380276 CDS2O95674 445 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 TOMM40O96008 361 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 IFNA21P01568 189 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 MED14OSP0DP75 135 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 HLA-DRB4P13762 266 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 SELENOHQ8IZQ5 122 aaKnown RBP16.56■□□□□ 0.24
U2AF1-202ENST00000380276 OR51G1Q8NGK1 321 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 HLA-DRB4X5D2U9 266 aa16.56■□□□□ 0.24
U2AF1-202ENST00000380276 RTL8CO15255 209 aa16.55■□□□□ 0.24
U2AF1-202ENST00000380276 BUB3O43684 328 aa16.55■□□□□ 0.24
U2AF1-202ENST00000380276 DEFB1P60022 68 aa16.55■□□□□ 0.24
U2AF1-202ENST00000380276 GLYATL2Q8WU03 294 aa16.55■□□□□ 0.24
U2AF1-202ENST00000380276 ABHD1Q96SE0 405 aa16.55■□□□□ 0.24
U2AF1-202ENST00000380276 SEPSECSQ9HD40 501 aaKnown RBP16.55■□□□□ 0.24
U2AF1-202ENST00000380276 CD74P04233 296 aa16.54■□□□□ 0.24
U2AF1-202ENST00000380276 PSG1P11464 419 aa16.54■□□□□ 0.24
U2AF1-202ENST00000380276 HTN3P15516 51 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms