RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 INS-IGF2F8WCM5 200 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 PPIAL4GP0DN37 164 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 MC5RP33032 325 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 ATP5IP56385 69 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 ZNF90Q03938 601 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 LDLRAD2Q5SZI1 272 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 ETFRF1Q6IPR1 90 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 OR4A5Q8NH83 315 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 SLC35E1Q96K37 410 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 CITED2Q99967 270 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 IGKV1D-37A0A075B6S9 117 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 IGHV1-3A0A0C4DH29 117 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 BUB1B-PAK6H3BSN5 160 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 K7EN84 100 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 OR5G3P0C626 314 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 MFAP2P55001 183 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 LY6DQ14210 128 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 VMA21Q3ZAQ7 101 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 HCP5Q6MZN7 132 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 C16orf92Q96LL3 132 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 MED13LQ71F56 2210 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 IGLC7A0M8Q6 106 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 OR7C2O60412 319 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 LIPFP07098 398 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 AREGP15514 252 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 OR2T10Q8NGZ9 312 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 SFRP2Q96HF1 295 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 TXNDC17Q9BRA2 123 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 CLEC7AQ9BXN2 247 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 INSIG2Q9Y5U4 225 aa6.39□□□□□ -1.39
PDLIM5-204ENST00000380176 PPP5D1E7EU14 171 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 H0Y8G0 127 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 GGCTO75223 188 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 CRYGBP07316 175 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 LGALS7P47929 136 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 TNXAQ16473 311 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 UHRF2Q96PU4 802 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 SLC25A33Q9BSK2 321 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 WNK2Q9Y3S1 2297 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 GGTLC3B5MD39 225 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 SNRPCP09234 159 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 IL3RAP26951 378 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 CRYBB3P26998 211 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 KHDC1LQ5JSQ8 128 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 PATE2Q6UY27 113 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 PNKDQ8N490 385 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 ZNF479Q96JC4 524 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 FAM167A-AS1Q96KT0 104 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 SLC25A2Q9BXI2 301 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 TECRQ9NZ01 308 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 ONECUT1Q9UBC0 465 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 SIGLEC9Q9Y336 463 aa6.38□□□□□ -1.39
PDLIM5-204ENST00000380176 A0A1W2PPR1 153 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 FCN1O00602 326 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 MT-CO2P00403 227 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 SRP14P37108 136 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 PYY3Q5JQD4 70 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 C9orf152Q5JTZ5 239 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 DNLZQ5SXM8 178 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 TEX38Q6PEX7 206 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 RNASEH2CQ8TDP1 164 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 AKAP6Q13023 2319 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 SLC17A3O00476 420 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 PPP1R2P9O14990 202 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 TGOLN2O43493 480 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 C8orf88P0DMB2 117 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 CD99P14209 185 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 ARF6P62330 175 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 OR5I1Q13606 314 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 TEX45Q8NA69 505 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 BEND2Q8NDZ0 799 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 OR8B3Q8NGG8 313 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 OR10D4PQ8NGN7 298 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 MISP3Q96FF7 219 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 OR8B2Q96RD0 313 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 FBXL15Q9H469 300 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 DNAJC4Q9NNZ3 241 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 TMEM167BQ9NRX6 74 aa6.37□□□□□ -1.39
PDLIM5-204ENST00000380176 MDFIC2A0A1B0GVS7 189 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 TCRBV4S1A1TA0A5B7 111 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 LY6LH3BQJ8 138 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 FSTL3O95633 263 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 MOSP00540 346 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 PYYP10082 97 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 SUB1P53999 127 aaKnown RBP eCLIP6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 FBLN7Q53RD9 439 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 Q5PR19 223 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 PQLC2Q6ZP29 291 aa6.36□□□□□ -1.39
PDLIM5-204ENST00000380176 LY6G5BQ8NDX9 201 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms