RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 MGST2Q99735 147 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 PXMP4Q9Y6I8 212 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 SPG11Q96JI7 2443 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 F6UZH7 168 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 INS-IGF2F8WCM5 200 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 EREGO14944 169 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 NUPR1O60356 82 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 MMD2Q8IY49 270 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 TMEM256Q8N2U0 113 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 SFRP2Q96HF1 295 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 RNF5Q99942 180 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 SIGLEC9Q9Y336 463 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 WNK2Q9Y3S1 2297 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 FOXH1O75593 365 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 TOX4O94842 621 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 OPRK1P41145 380 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 IQCJQ1A5X6 159 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 MIC13Q5XKP0 118 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 SGMS2Q8NHU3 365 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 PIMREGQ9BSJ6 248 aa15.54■□□□□ 0.08
SSU72-204ENST00000378726 UBR5O95071 2799 aaPredicted RBP15.54■□□□□ 0.08
SSU72-204ENST00000378726 A1L4Q6 167 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 ACTL6BO94805 426 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 HOXB4P17483 251 aaPredicted RBP15.53■□□□□ 0.08
SSU72-204ENST00000378726 HNF1AP20823 631 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 WT1-ASQ06250 92 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 FOXL1Q12952 345 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 C1orf159Q96HA4 380 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 IMMP2LQ96T52 175 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 PPP1R14DQ9NXH3 145 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 FAM208BQ5VWN6 2430 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 SCO2A0A1W2PP80 73 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 COX6B1P14854 86 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 LGALS4P56470 323 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 PPP1R27Q86WC6 154 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 C10orf105Q8TEF2 133 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 CFHR4Q92496 578 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 RBM14Q96PK6 669 aaKnown RBP15.53■□□□□ 0.08
SSU72-204ENST00000378726 GGTLC1Q9BX51 225 aa15.53■□□□□ 0.08
SSU72-204ENST00000378726 STAG3L2P0CL84 134 aa15.52■□□□□ 0.08
SSU72-204ENST00000378726 STAG3L3P0CL85 134 aa15.52■□□□□ 0.08
SSU72-204ENST00000378726 TNXAQ16473 311 aa15.52■□□□□ 0.08
SSU72-204ENST00000378726 FBXL15Q9H469 300 aa15.52■□□□□ 0.08
SSU72-204ENST00000378726 LPAR2Q9HBW0 351 aa15.52■□□□□ 0.08
SSU72-204ENST00000378726 LSM4Q9Y4Z0 139 aaKnown RBP15.52■□□□□ 0.08
SSU72-204ENST00000378726 MLANAQ16655 118 aa15.52■□□□□ 0.07
SSU72-204ENST00000378726 TEX38Q6PEX7 206 aa15.52■□□□□ 0.07
SSU72-204ENST00000378726 TEPPQ6URK8 271 aa15.52■□□□□ 0.07
SSU72-204ENST00000378726 CLEC2AQ6UVW9 174 aa15.52■□□□□ 0.07
SSU72-204ENST00000378726 SNHG12Q9BXW3 62 aa15.52■□□□□ 0.07
SSU72-204ENST00000378726 VPS13CQ709C8 3753 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 MDFIC2A0A1B0GVS7 189 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 M0R143 59 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 NDUFS8O00217 210 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 CD24P25063 80 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 OCC1Q8TAD7 63 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 NRGNQ92686 78 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 TBX15Q96SF7 602 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 ATG101Q9BSB4 218 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 YTHDF2Q9Y5A9 579 aaKnown RBP15.51■□□□□ 0.07
SSU72-204ENST00000378726 LRRK2Q5S007 2527 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 IGHV4-61A0A0C4DH41 118 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 FNDC10F2Z333 226 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 PLXNB1O43157 2135 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 SCGB1D1O95968 90 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 ADMP35318 185 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 RPL27AP46776 148 aaKnown RBP15.51■□□□□ 0.07
SSU72-204ENST00000378726 ERVFC1-1P60608 527 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 MINOS1Q5TGZ0 78 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 CRYBG3Q68DQ2 2970 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 SSMEM1Q8WWF3 244 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 MINOS1-NBL1R4GNA1 71 aa15.51■□□□□ 0.07
SSU72-204ENST00000378726 SVEP1Q4LDE5 3571 aa15.5■□□□□ 0.07
SSU72-204ENST00000378726 CXorf1O96002 111 aa15.5■□□□□ 0.07
SSU72-204ENST00000378726 SUB1P53999 127 aaKnown RBP eCLIP15.5■□□□□ 0.072e-8■■■■□ 19.7
SSU72-204ENST00000378726 DYNAPQ8N1N2 210 aa15.5■□□□□ 0.07
SSU72-204ENST00000378726 PERPQ96FX8 193 aa15.5■□□□□ 0.07
SSU72-204ENST00000378726 VWC2LB2RUY7 222 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 FCN1O00602 326 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 SOX15O60248 233 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 RAB4AP20338 218 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 COMPP49747 757 aaPredicted RBP15.49■□□□□ 0.07
SSU72-204ENST00000378726 PLGLAQ15195 96 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 SPATA31B1PQ5VZV4 182 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 CCDC144NLQ6NUI1 221 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 MOSP00540 346 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 UBE2E1P51965 193 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 CD69Q07108 199 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 RAB31Q13636 194 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 HES1Q14469 280 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 MMDQ15546 238 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 BTF3L4Q96K17 158 aa15.49■□□□□ 0.07
SSU72-204ENST00000378726 POLR3KQ9Y2Y1 108 aaPredicted RBP15.49■□□□□ 0.07
SSU72-204ENST00000378726 OOSP1A8MZH6 123 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 REG1AP05451 166 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 G0S2P27469 103 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 RELQ04864 619 aaPredicted RBP15.48■□□□□ 0.07
SSU72-204ENST00000378726 OR10G8Q8NGN5 311 aa15.48■□□□□ 0.07
SSU72-204ENST00000378726 EAF1Q96JC9 268 aaPredicted RBP15.48■□□□□ 0.07
SSU72-204ENST00000378726 IGHV4-30-2A0A087WSY4 118 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms