RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 RPS10-NUDT3A0A1W2PQS6 291 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 NDUFB6O95139 128 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 HOXB5P09067 269 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 IL7P13232 177 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 NPIPB3Q92617 1050 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 GINS3Q9BRX5 216 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 U3KQ87 197 aa11.4□□□□□ -0.58
RAB4B-202ENST00000378307 C9orf170A2RU37 121 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 NAP1L6A6NFF2 107 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 MPTX1A8MV57 137 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 PLA2G10O15496 165 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 IAPPP10997 89 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 SLC25A4P12235 298 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 OR10J1P30954 320 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 INPP1P49441 399 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 GGNBP1Q5YKI7 109 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 FAM24BQ8N5W8 94 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 ACY3Q96HD9 319 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 CACFD1Q9UGQ2 172 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 TMED3Q9Y3Q3 217 aa11.39□□□□□ -0.59
RAB4B-202ENST00000378307 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 ADAP1O75689 374 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 SLC25A6P12236 298 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 ANXA7P20073 488 aaKnown RBP11.38□□□□□ -0.59
RAB4B-202ENST00000378307 NPPCP23582 126 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 CRYBB3P26998 211 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 MAGT1Q9H0U3 335 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 MS4A6AQ9H2W1 248 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 U3KQE9 123 aa11.38□□□□□ -0.59
RAB4B-202ENST00000378307 LYSTQ99698 3801 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 OR4E1P0C645 316 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
RAB4B-202ENST00000378307 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
RAB4B-202ENST00000378307 DHRS2Q13268 280 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
RAB4B-202ENST00000378307 ZFAND6Q6FIF0 208 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 AGRNO00468 2067 aa11.37□□□□□ -0.59
RAB4B-202ENST00000378307 PLECQ15149 4684 aaKnown RBP11.36□□□□□ -0.59
RAB4B-202ENST00000378307 IGKV1D-37A0A075B6S9 117 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 IFNA4P05014 189 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 LYL1P12980 280 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 UBE2MP61081 183 aaKnown RBP11.36□□□□□ -0.59
RAB4B-202ENST00000378307 GAMTQ14353 236 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 NOXA1Q86UR1 476 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 Q8WTZ3 238 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 METTL26Q96S19 204 aa11.36□□□□□ -0.59
RAB4B-202ENST00000378307 FAM90A26D6RGX4 464 aa11.35□□□□□ -0.59
RAB4B-202ENST00000378307 P2RY1P47900 373 aa11.35□□□□□ -0.59
RAB4B-202ENST00000378307 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
RAB4B-202ENST00000378307 C7orf50Q9BRJ6 194 aaKnown RBP11.35□□□□□ -0.59
RAB4B-202ENST00000378307 TENM2Q9NT68 2774 aa11.35□□□□□ -0.59
RAB4B-202ENST00000378307 DNAH1Q9P2D7 4330 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 PIGBOS1A0A0B4J2F0 54 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 A0A1W2PS18 150 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 CENPXA8MT69 81 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 PRSS46E5RG02 174 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 WRBO00258 174 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 SYNGR2O43760 224 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 TOMM40O96008 361 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 IL4P05112 153 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 PSG1P11464 419 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 ZNF90Q03938 601 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 LYG2Q86SG7 212 aa11.34□□□□□ -0.59
RAB4B-202ENST00000378307 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
RAB4B-202ENST00000378307 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 CD5P06127 495 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 HNRNPCP07910 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
RAB4B-202ENST00000378307 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 BMI1P35226 326 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
RAB4B-202ENST00000378307 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
RAB4B-202ENST00000378307 DEFB131AP59861 70 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 GLMPQ8WWB7 406 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
RAB4B-202ENST00000378307 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
RAB4B-202ENST00000378307 A6NHS1 94 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 K7EQG2 157 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 LYRM1O43325 122 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 APOC4P55056 127 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
RAB4B-202ENST00000378307 ID3Q02535 119 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 CNPY1Q3B7I2 92 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 C4orf46Q504U0 113 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
RAB4B-202ENST00000378307 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms