RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 RPL11P62913 178 aaKnown RBP16.55■□□□□ 0.24
SRM-201ENST00000376957 FAM110AQ9BQ89 295 aa16.55■□□□□ 0.24
SRM-201ENST00000376957 LOC102724200A0A096LPH7 203 aaPredicted RBP16.54■□□□□ 0.24
SRM-201ENST00000376957 IGHV3-49A0A0A0MS15 119 aa16.54■□□□□ 0.24
SRM-201ENST00000376957 LYRM1O43325 122 aa16.54■□□□□ 0.24
SRM-201ENST00000376957 FABP1P07148 127 aa16.54■□□□□ 0.24
SRM-201ENST00000376957 LYG2Q86SG7 212 aa16.54■□□□□ 0.24
SRM-201ENST00000376957 ZFAND3Q9H8U3 227 aa16.54■□□□□ 0.24
SRM-201ENST00000376957 DNASE2O00115 360 aaPredicted RBP16.53■□□□□ 0.24
SRM-201ENST00000376957 WRBO00258 174 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 SYNGR2O43760 224 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 GPX4P36969 197 aaPredicted RBP16.53■□□□□ 0.24
SRM-201ENST00000376957 DHRS2Q13268 280 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 TIGITQ495A1 244 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 GGNBP1Q5YKI7 109 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 LINC00322Q6ZN03 302 aaPredicted RBP16.53■□□□□ 0.24
SRM-201ENST00000376957 NPIPB3Q92617 1050 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 ACY3Q96HD9 319 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 SLC35E1Q96K37 410 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 GGTLC1Q9BX51 225 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 PFDN2Q9UHV9 154 aa16.53■□□□□ 0.24
SRM-201ENST00000376957 PAIP2BQ9ULR5 123 aaKnown RBP16.53■□□□□ 0.24
SRM-201ENST00000376957 IGLC1P0CG04 106 aa16.52■□□□□ 0.24
SRM-201ENST00000376957 TCF24Q7RTU0 167 aa16.52■□□□□ 0.24
SRM-201ENST00000376957 WFDC10AQ9H1F0 79 aa16.52■□□□□ 0.24
SRM-201ENST00000376957 VSIRQ9H7M9 311 aa16.52■□□□□ 0.24
SRM-201ENST00000376957 MRPL36Q9P0J6 103 aaKnown RBP16.52■□□□□ 0.24
SRM-201ENST00000376957 FLVCR2Q9UPI3 526 aa16.52■□□□□ 0.24
SRM-201ENST00000376957 IGKV3-7A0A075B6H7 116 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 IGHV3OR16-13A0A075B7E8 117 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 IGHV3-74A0A0B4J1X5 117 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 RBMY1BA6NDE4 496 aaKnown RBP16.51■□□□□ 0.23
SRM-201ENST00000376957 RBMY1EA6NEQ0 496 aaKnown RBP16.51■□□□□ 0.23
SRM-201ENST00000376957 IGKV1-17P01599 117 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 RBMY1DP0C7P1 496 aaKnown RBP16.51■□□□□ 0.23
SRM-201ENST00000376957 RD3LP0DJH9 198 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 APOC4P55056 127 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 MZT2BQ6NZ67 158 aa16.51■□□□□ 0.23
SRM-201ENST00000376957 ZFP92A6NM28 416 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 IAPPP10997 89 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 ANXA7P20073 488 aaKnown RBP16.5■□□□□ 0.23
SRM-201ENST00000376957 CRYBB3P26998 211 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 CITED4Q96RK1 184 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 C20orf85Q9H1P6 137 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 UBQLN2Q9UHD9 624 aa16.5■□□□□ 0.23
SRM-201ENST00000376957 BTCP35070 178 aa16.49■□□□□ 0.23
SRM-201ENST00000376957 TFPI2P48307 235 aa16.49■□□□□ 0.23
SRM-201ENST00000376957 AP2S1P53680 142 aaPredicted RBP16.49■□□□□ 0.23
SRM-201ENST00000376957 TMEM170AQ8WVE7 144 aa16.49■□□□□ 0.23
SRM-201ENST00000376957 ZNF414Q96IQ9 312 aa16.49■□□□□ 0.23
SRM-201ENST00000376957 TRAV2A0A0B4J234 112 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 ADAP1O75689 374 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 DFFBO76075 338 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 TOMM40O96008 361 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 TCRBP04435 133 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 IL4P05112 153 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 HNRNPCP07910 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
SRM-201ENST00000376957 NUP62P37198 522 aaPredicted RBP16.48■□□□□ 0.23
SRM-201ENST00000376957 FAM90A2PQ658T7 463 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 GBGT1Q8N5D6 347 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 WDR12Q9GZL7 423 aaKnown RBP16.48■□□□□ 0.23
SRM-201ENST00000376957 MAGT1Q9H0U3 335 aa16.48■□□□□ 0.23
SRM-201ENST00000376957 STRAPQ9Y3F4 350 aaKnown RBP16.48■□□□□ 0.23
SRM-201ENST00000376957 IGHV3-66A0A0C4DH42 116 aa16.47■□□□□ 0.23
SRM-201ENST00000376957 HELTA6NFD8 242 aa16.47■□□□□ 0.23
SRM-201ENST00000376957 PLA2G10O15496 165 aa16.47■□□□□ 0.23
SRM-201ENST00000376957 NKX2-1P43699 371 aaPredicted RBP16.47■□□□□ 0.23
SRM-201ENST00000376957 OR51G1Q8NGK1 321 aa16.47■□□□□ 0.23
SRM-201ENST00000376957 MUC7Q8TAX7 377 aa16.47■□□□□ 0.23
SRM-201ENST00000376957 FAM240BA0A1B0GVZ2 78 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 A6NHS1 94 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 UBE2CO00762 179 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 APOHP02749 345 aaPredicted RBP16.46■□□□□ 0.23
SRM-201ENST00000376957 P2RY1P47900 373 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 ID3Q02535 119 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 GAMTQ14353 236 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 ZNF846Q147U1 533 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 SPANXN5Q5MJ07 72 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 STPG3Q8N7X2 389 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 MITD1Q8WV92 249 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 MS4A6AQ9H2W1 248 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 BATF3Q9NR55 127 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 PTTG2Q9NZH5 202 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 RABAC1Q9UI14 185 aa16.46■□□□□ 0.23
SRM-201ENST00000376957 ODF3L2Q3SX64 289 aa16.45■□□□□ 0.22
SRM-201ENST00000376957 WFDC3Q8IUB2 231 aa16.45■□□□□ 0.22
SRM-201ENST00000376957 NUDT15Q9NV35 164 aa16.45■□□□□ 0.22
SRM-201ENST00000376957 KIR2DL5BA0A0G2JN68 375 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 KIR2DL5BA0A0G2JPC4 375 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 SNRPGP15A8MWD9 76 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 CFDP00746 253 aaPredicted RBP16.44■□□□□ 0.22
SRM-201ENST00000376957 S100A7P31151 101 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 IAH1Q2TAA2 248 aaPredicted RBP16.44■□□□□ 0.22
SRM-201ENST00000376957 KIR2DL5AQ8N109 375 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 KIR2DL5BQ8NHK3 375 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 IL17DQ8TAD2 202 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 PSENENQ9NZ42 101 aa16.44■□□□□ 0.22
SRM-201ENST00000376957 TRAV6A0A075B6T7 132 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms