RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 OTORQ9NRC9 128 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 GAGE13Q4V321 117 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 TMEM155Q4W5P6 130 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 C7orf69Q9H7B7 122 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 JPT2Q9H910 190 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 EFEMP2O95967 443 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
VPS13A-204ENST00000376634 SLC25A45Q8N413 288 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 PLAC1Q9HBJ0 212 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 SLC25A38Q96DW6 304 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
VPS13A-204ENST00000376634 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 PRDM13Q9H4Q3 707 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 LILRA1O75019 489 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 EFNB1P98172 346 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 NBR2O15453 112 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 CD8AP01732 235 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 TRGV11A0A075B6L2 103 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 FAM90A1Q86YD7 464 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 GP6Q9HCN6 339 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 ATG2AQ2TAZ0 1938 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 IFI6P09912 130 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 GZMMP51124 257 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 LURAP1LQ8IV03 231 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 IGHV3OR16-8A0A075B7F1 116 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 F8WEM9 126 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 ZNF708P17019 499 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 PILRAQ9UKJ1 303 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 EGR4Q05215 589 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 SAP25Q8TEE9 199 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 NAPSAO96009 420 aa10.5□□□□□ -0.73
VPS13A-204ENST00000376634 TGIF1Q15583 401 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 ASCL4Q6XD76 172 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 ZNF48Q96MX3 618 aaPredicted RBP10.49□□□□□ -0.73
VPS13A-204ENST00000376634 ANKHD1Q8IWZ3 2542 aaKnown RBP10.49□□□□□ -0.73
VPS13A-204ENST00000376634 SLC50A1Q9BRV3 221 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 CECR9P0C854 216 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 AMELYQ99218 206 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 NRN1Q9NPD7 142 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 HS3ST3B1Q9Y662 390 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 IMMP2LQ96T52 175 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 IGHV2OR16-5A0A0B4J2B6 119 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
VPS13A-204ENST00000376634 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
VPS13A-204ENST00000376634 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 LAGE3Q14657 143 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 PPBPP02775 128 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 SEC11AP67812 179 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 EVI2AP22794 236 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 SAA2-SAA4A0A096LPE2 208 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 HBDP02042 147 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 SAA2P0DJI9 122 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-204ENST00000376634 FDCSPQ8NFU4 85 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 PTPRBP23467 1997 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 F2Z2F3 143 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 PSCAO43653 123 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 TOMM40O96008 361 aa10.48□□□□□ -0.73
VPS13A-204ENST00000376634 SERF1AO75920 110 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 LINC00158P58513 81 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 OR13A1Q8NGR1 328 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 TRAV9-2A0A087WT02 112 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 ATP1A1-AS1Q5TC04 95 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
VPS13A-204ENST00000376634 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 RNASE7Q9H1E1 156 aaKnown RBP10.47□□□□□ -0.73
VPS13A-204ENST00000376634 CRYBA2P53672 197 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 RNF125Q96EQ8 232 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 UMODP07911 640 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 TNFRSF6BO95407 300 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 IGKCP01834 107 aa10.47□□□□□ -0.73
VPS13A-204ENST00000376634 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 KLF4O43474 513 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 NOTCH2Q04721 2471 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 CD160O95971 181 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 NRN1LQ496H8 165 aa10.46□□□□□ -0.73
VPS13A-204ENST00000376634 TRAV14DV4A0A0A6YYC5 116 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 EGR1P18146 543 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 GNG5P63218 68 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 CARHSP1Q9Y2V2 147 aaKnown RBP10.46□□□□□ -0.74
VPS13A-204ENST00000376634 C17orf98A8MV24 154 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 RSPO4Q2I0M5 234 aaPredicted RBP10.46□□□□□ -0.74
VPS13A-204ENST00000376634 CFHR5Q9BXR6 569 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 PRSS22Q9GZN4 317 aa10.46□□□□□ -0.74
VPS13A-204ENST00000376634 NSUN5P1Q3KNT7 163 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms