RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 PRR20CP86479 221 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 PRR20DP86480 221 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 PRR20BP86481 221 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 PRR20AP86496 221 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 TMEM268Q5VZI3 342 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 TRIM63Q969Q1 353 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
CLCN6-207ENST00000376497 CACNG5Q9UF02 275 aa11.18□□□□□ -0.62
CLCN6-207ENST00000376497 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 AGRNO00468 2067 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 GNG7O60262 68 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 SNCAP37840 140 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 ASAH1Q13510 395 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 TMEM187Q14656 261 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 TOMM20LQ6UXN7 152 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
CLCN6-207ENST00000376497 VSIRQ9H7M9 311 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 MCUBQ9NWR8 336 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 TBC1D24Q9ULP9 559 aa11.17□□□□□ -0.62
CLCN6-207ENST00000376497 PLA2G10O15496 165 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 DFFBO76075 338 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 TMEM50AO95807 157 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-207ENST00000376497 KLF9Q13886 244 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-207ENST00000376497 SURF2Q15527 256 aaPredicted RBP11.16□□□□□ -0.62
CLCN6-207ENST00000376497 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 PRRT1Q99946 306 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 GINS3Q9BRX5 216 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 PDCD10Q9BUL8 212 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
CLCN6-207ENST00000376497 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN6-207ENST00000376497 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 LINC00854A0A1B0GVQ3 168 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 DEFB4AO15263 64 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 AKR1C4P17516 323 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 AP3S2P59780 193 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 C7orf50Q9BRJ6 194 aaKnown RBP11.15□□□□□ -0.62
CLCN6-207ENST00000376497 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
CLCN6-207ENST00000376497 ATG12O94817 140 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 PTTG1O95997 202 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 OPRK1P41145 380 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 DEFB131AP59861 70 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 SPCS3P61009 180 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 DHODHQ02127 395 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 OXA1LQ15070 435 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 TIGITQ495A1 244 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 Q8NAQ8 132 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 DUSP18Q8NEJ0 188 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 DEDD2Q8WXF8 326 aa11.14□□□□□ -0.63
CLCN6-207ENST00000376497 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-207ENST00000376497 CENPXA8MT69 81 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 IGLL5B9A064 214 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 DNASE2O00115 360 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-207ENST00000376497 LYRM1O43325 122 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 B3GALNT1O75752 331 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 IGKV1-17P01599 117 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
CLCN6-207ENST00000376497 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-207ENST00000376497 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 CEBPZOSA8MTT3 80 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 CLN5O75503 358 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 NPBWR1P48145 328 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 Q6ZNX1 250 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 TMED4Q7Z7H5 227 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 FAM219AQ8IW50 185 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 STHQ8IWL8 128 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 SCP2D1Q9UJQ7 156 aa11.12□□□□□ -0.63
CLCN6-207ENST00000376497 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-207ENST00000376497 SUB1P53999 127 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN6-207ENST00000376497 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
CLCN6-207ENST00000376497 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
CLCN6-207ENST00000376497 OR4X1Q8NH49 305 aa11.11□□□□□ -0.63
CLCN6-207ENST00000376497 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 ZNF705EA8MWA4 302 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-207ENST00000376497 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
CLCN6-207ENST00000376497 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 SULT1A3P0DMM9 295 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 SULT1A4P0DMN0 295 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 MIFP14174 115 aa11.1□□□□□ -0.63
CLCN6-207ENST00000376497 FAUP35544 74 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms