RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF891A8MT65 544 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LY6HO94772 140 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FAM87AP0C7U9 286 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FXYD7P58549 80 aa11.75□□□□□ -0.53
TNFRSF1B-201ENST00000376259 RPL27AP46776 148 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 UNQ5815/PRO19632Q6UWF5 114 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 MIEN1Q9BRT3 115 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C2orf88Q9BSF0 95 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CDC42EP3Q9UKI2 254 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 MKRN2OSH3BPM6 223 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NBEAP1P0C6P0 100 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PEX7O00628 323 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 HYPMO75409 117 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CT45A10P0DMU9 189 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 HIST1H1EP10412 219 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CD69Q07108 199 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 BSPH1Q075Z2 132 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NEUROG1Q92886 237 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LYPD2Q6UXB3 125 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 VPS25Q9BRG1 176 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TPSG1Q9NRR2 321 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 DMXL2Q8TDJ6 3036 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TMEM265A0A087WTH1 108 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SRSF12Q8WXF0 261 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 BMPR1BO00238 502 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 KLF17Q5JT82 389 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C1orf185Q5T7R7 199 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 VSTM2AQ8TAG5 236 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 UQCR10Q9UDW1 63 aa11.73□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 MT-ND6P03923 174 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LOXL3P58215 753 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ARF6P62330 175 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TBR1Q16650 682 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C17orf58Q2M2W7 97 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PERPQ96FX8 193 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NUDT11Q96G61 164 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR5AL1P0C617 328 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 CD99P14209 185 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SLAQ13239 276 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FA2HQ7L5A8 372 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 EXOC3-AS1Q8N2X6 119 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 OR8B3Q8NGG8 313 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PRR7Q8TB68 274 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 KCNS1Q96KK3 526 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 WNT2P09544 360 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TDGF1P3P51864 188 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 FOXC1Q12948 553 aa11.72□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGKV3-7A0A075B6H7 116 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 K7EM74 188 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 TNFSF13O75888 250 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 GPX1P07203 203 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 AREGP15514 252 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 NHLH1Q02575 133 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LINC01560Q8TB33 94 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 RPUSD1Q9UJJ7 312 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 M0QZK8 103 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.53
TNFRSF1B-201ENST00000376259 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CNTFRP26992 372 aa11.71□□□□□ -0.54
TNFRSF1B-201ENST00000376259 FCGR2BP31994 310 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.54
TNFRSF1B-201ENST00000376259 ADGRG4Q8IZF6 3080 aa11.71□□□□□ -0.54
TNFRSF1B-201ENST00000376259 E7EUB6 86 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CIARTQ8N365 385 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RAB1CQ92928 201 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 V9GYV3 84 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 SORL1Q92673 2214 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 A0A1W2PS18 150 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CRYABP02511 175 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms