RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SP6Q3SY56 376 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 TIGITQ495A1 244 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 C2orf83Q53S99 150 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 ETFRF1Q6IPR1 90 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 C16orf54Q6UWD8 224 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 NOXA1Q86UR1 476 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 TMEM229BQ8NBD8 167 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 CSNK1G2-AS1Q8NCQ2 148 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 OR52I2Q8NH67 350 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 TMEM222Q9H0R3 208 aa16.79■□□□□ 0.28
C9orf47-202ENST00000375850 GSTZ1O43708 216 aaPredicted RBP16.78■□□□□ 0.28
C9orf47-202ENST00000375850 IGLC1P0CG04 106 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 MLANAQ16655 118 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 OR13C8Q8NGS7 320 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 GLMPQ8WWB7 406 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 RAB40CQ96S21 281 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 HEYLQ9NQ87 328 aaPredicted RBP16.78■□□□□ 0.28
C9orf47-202ENST00000375850 VPS13DQ5THJ4 4388 aa16.78■□□□□ 0.28
C9orf47-202ENST00000375850 ELOA3CA0A087WX78 387 aaPredicted RBP16.77■□□□□ 0.28
C9orf47-202ENST00000375850 A0A0G2JRQ6 117 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 AMBPP02760 352 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 OR10J1P30954 320 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 SSBP1Q04837 148 aaKnown RBP16.77■□□□□ 0.28
C9orf47-202ENST00000375850 SCGB2B2Q4G0G5 96 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 PSMG4Q5JS54 123 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 PRSS54Q6PEW0 395 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 RBPMSQ93062 196 aaKnown RBP16.77■□□□□ 0.28
C9orf47-202ENST00000375850 EXTL2Q9UBQ6 330 aa16.77■□□□□ 0.28
C9orf47-202ENST00000375850 C14orf166Q9Y224 244 aaKnown RBP16.77■□□□□ 0.28
C9orf47-202ENST00000375850 HECTD4Q9Y4D8 3996 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 RAB3DO95716 219 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 ZNF182P17025 639 aaPredicted RBP16.76■□□□□ 0.27
C9orf47-202ENST00000375850 RND2P52198 227 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 DHODHQ02127 395 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 SURF2Q15527 256 aaPredicted RBP16.76■□□□□ 0.27
C9orf47-202ENST00000375850 RNASE12Q5GAN4 147 aaKnown RBP16.76■□□□□ 0.27
C9orf47-202ENST00000375850 Q6ZRM9 215 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 SLC24A4Q8NFF2 622 aa16.76■□□□□ 0.27
C9orf47-202ENST00000375850 P0DMU3 169 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 FAM231AP0DMU4 169 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 FAM231CP0DMU5 169 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 NPY1RP25929 384 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 NUP62P37198 522 aaPredicted RBP16.75■□□□□ 0.27
C9orf47-202ENST00000375850 MRPS10P82664 201 aaKnown RBP16.75■□□□□ 0.27
C9orf47-202ENST00000375850 MEF2DQ14814 521 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 STEAP1BQ6NZ63 245 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 MARCH1Q8TCQ1 289 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 NRN1Q9NPD7 142 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 PFDN2Q9UHV9 154 aa16.75■□□□□ 0.27
C9orf47-202ENST00000375850 TEX13DA0A0J9YY54 714 aaPredicted RBP16.74■□□□□ 0.27
C9orf47-202ENST00000375850 OR5AC1P0C628 307 aa16.74■□□□□ 0.27
C9orf47-202ENST00000375850 OR4D10Q8NGI6 311 aa16.74■□□□□ 0.27
C9orf47-202ENST00000375850 GLYATL2Q8WU03 294 aa16.74■□□□□ 0.27
C9orf47-202ENST00000375850 CLEC5AQ9NY25 188 aa16.74■□□□□ 0.27
C9orf47-202ENST00000375850 DEFB131BA0A096LNP1 70 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 CEBPZOSA8MTT3 80 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 FAM90A26D6RGX4 464 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 GABARAPH6UMI1 98 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 GABARAPO95166 117 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 IL4P05112 153 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 NAA60Q9H7X0 242 aa16.73■□□□□ 0.27
C9orf47-202ENST00000375850 BUB3O43684 328 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 TOMM40O96008 361 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 SIGLEC15Q6ZMC9 328 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 NEU1Q99519 415 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 NDUFAF3Q9BU61 184 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 CACNG5Q9UF02 275 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 DNAH6Q9C0G6 4158 aa16.72■□□□□ 0.27
C9orf47-202ENST00000375850 TMEM189A5PLL7 270 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 H3BMM0 161 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 RD3LP0DJH9 198 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 USF2Q15853 346 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-202ENST00000375850 C12orf74Q32Q52 190 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 GPR107Q5VW38 600 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 SELENOHQ8IZQ5 122 aaKnown RBP16.71■□□□□ 0.27
C9orf47-202ENST00000375850 POM121L12Q8N7R1 296 aa16.71■□□□□ 0.27
C9orf47-202ENST00000375850 DISC1C4P0D8 188 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 HLA-DRB4P13762 266 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 NKX2-1P43699 371 aaPredicted RBP16.7■□□□□ 0.26
C9orf47-202ENST00000375850 LHFPL5Q8TAF8 219 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 IL22RA2Q969J5 263 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 RTBDNQ9BSG5 229 aaPredicted RBP16.7■□□□□ 0.26
C9orf47-202ENST00000375850 CELA1Q9UNI1 258 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 HLA-DRB4X5D2U9 266 aa16.7■□□□□ 0.26
C9orf47-202ENST00000375850 TEX48A0A1B0GUV7 120 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 SMIM9A6NGZ8 99 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 TMEM268Q5VZI3 342 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 NPIPB3Q92617 1050 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 GPR146Q96CH1 333 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 XCL2Q9UBD3 114 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 TMEM56-RWDD3S4R434 201 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 U3KQ87 197 aa16.69■□□□□ 0.26
C9orf47-202ENST00000375850 AGRNO00468 2067 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 CRYM-AS1A6NIL9 109 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 ATP5IP56385 69 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-202ENST00000375850 CTF1Q16619 201 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 OR8G2PQ6IF36 304 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 ZNF705AQ6ZN79 300 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-202ENST00000375850 FAM210BQ96KR6 192 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms