RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 IGHV3OR16-8A0A075B7F1 116 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 NUTF2P61970 127 aaKnown RBP9.55□□□□□ -0.88
PTCH1-203ENST00000375274 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 FER1L6-AS1Q8NA97 138 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 LINC01560Q8TB33 94 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 KIR2DL4Q99706 377 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 MGST2Q99735 147 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 LINC00473A8K010 186 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 GZMBP10144 247 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 CD33P20138 364 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 PSMG4Q5JS54 123 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 Q6P435 159 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 TRAV5A0A0B4J249 113 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 NPIPB6E9PJ23 425 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 TMEM50AO95807 157 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 GPR183P32249 361 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 ARL6IP6Q8N6S5 226 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 EEF1AKMT3Q96AZ1 226 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 FBXL7Q9UJT9 491 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 ATP5G2Q06055 141 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 C10orf55Q5SWW7 151 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 M0R381 172 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 ETV2O00321 342 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-203ENST00000375274 AREGP15514 252 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 B3GALT5-AS1P59052 145 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 IGKV1-6A0A0C4DH72 117 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 NTF4P34130 210 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 ZNF585BQ52M93 769 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 FOXC2Q99958 501 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 PLCE1Q9P212 2302 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 PLXND1Q9Y4D7 1925 aa9.54□□□□□ -0.88
PTCH1-203ENST00000375274 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 C15orf62A8K5M9 175 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 C10orf91Q5T1B1 145 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 CLEC2AQ6UVW9 174 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 SPCS1Q9Y6A9 102 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 HELZP42694 1942 aaKnown RBP9.53□□□□□ -0.88
PTCH1-203ENST00000375274 A6NNC1 897 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 GFRA3O60609 400 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 LGALS3P17931 250 aaKnown RBP9.53□□□□□ -0.88
PTCH1-203ENST00000375274 LINC00205P59089 165 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 RNFT1Q5M7Z0 435 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 C2orf88Q9BSF0 95 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 LIME1Q9H400 295 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 IGKV3-15P01624 115 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 BMPERQ8N8U9 685 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 FAM57AQ8TBR7 257 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 COQ2Q96H96 371 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 TMEM133Q9H2Q1 129 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-203ENST00000375274 Q0VFX4 171 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 ATP5L2Q7Z4Y8 100 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
PTCH1-203ENST00000375274 FAM159AQ6UWV7 190 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 LURAP1LQ8IV03 231 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 TMEM105Q8N8V8 129 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 H3BUT2 72 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 DLEU1O43261 78 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 PFN1P07737 140 aaKnown RBP9.52□□□□□ -0.89
PTCH1-203ENST00000375274 FBLN7Q53RD9 439 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 ARPC1AQ92747 370 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 PRB3Q04118 309 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-203ENST00000375274 CD177Q8N6Q3 437 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 LY96Q9Y6Y9 160 aa9.52□□□□□ -0.89
PTCH1-203ENST00000375274 THSD7BQ9C0I4 1608 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 IGHV1-46P01743 117 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 PVRIGQ6DKI7 326 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 NOTCH4Q99466 2003 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 PLXNA4Q9HCM2 1894 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 FOXH1O75593 365 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 COLCA1Q6ZS62 124 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 HBDP02042 147 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 CHCHD1Q96BP2 118 aaKnown RBP9.51□□□□□ -0.89
PTCH1-203ENST00000375274 C5orf30Q96GV9 206 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 NBR2O15453 112 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 LY6EQ16553 131 aa9.51□□□□□ -0.89
PTCH1-203ENST00000375274 MBNL3Q9NUK0 354 aaKnown RBP9.51□□□□□ -0.89
PTCH1-203ENST00000375274 ANAPC1Q9H1A4 1944 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms